Job Description P46853 Confidence 98.85% Date Wed Jan 25 15:20:56 GMT 2012 Rank 84 Aligned Residues 146 % Identity 15% Template c3c8mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of homoserine dehydrogenase from thermoplasma2 volcanium Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	.	.	.	.	.	.	.	S	W	H	V	A	H	I	F	R	R	.	.	.	.	.	.	.	.	.	.	.	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D
Query Conservation																												.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.										.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		T	I	N	L	S	I	F	G	L	G	N	V	G	L	N	L	.	L	R	I	I	R	S	F	N	E	E	N	R	L	G	L	K	F	N	V	V	F	V	A	D	S	L	H	S	Y	Y	N	E	R	I	D	I	G	K	V	I	S	Y	K	E	K	G	S	L	D	S	L	E	Y	E	S	I	S	A	S	E	A	L	A
Template Known Secondary structure											S							.												S	S	S											S	S						T	T												T	T		G	G	G			S
Template Predicted Secondary structure																		.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																											.
Query SS confidence																	.	.	.	.																																											.
Query Sequence		P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	.	.	.	.	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	.	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I
Query Conservation																	.	.	.	.																																											.
Alig confidence																	.	.	.	.																				.																							.
Template Conservation																																								.
Template Sequence		R	D	F	D	I	V	V	D	A	T	P	A	S	A	D	G	K	K	E	L	A	F	Y	K	E	T	F	E	N	G	K	D	V	V	T	A	N	K	.	S	G	L	A	N	F	W	P	E	I	X	E	Y	A	R	S	N	N	R	R	I	R	Y	E	A	T	V	A	G	G	V	P	L	F	S	F	I	D	Y	S	V
Template Known Secondary structure		S	S		S						S				S	S	S													T	T									.																		T						G	G	G	S	S	T	T	S										S
Template Predicted Secondary structure																																								.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		139	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	K	L	G	E	I	V	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	S	R	I	K	K	F	R	G	I
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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