Return to main results Retrieve Phyre Job Id

Job DescriptionP46853
Confidence98.58%DateWed Jan 25 15:20:56 GMT 2012
Rank95Aligned Residues119
% Identity8%Templatec3b1fA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAK
Query Conservation 





 
      
   
        
         
   
             


     
 
 
 

   
     
Alig confidence 













.












































..

















Template Conservation   
 


 
 

 

.
  
   
    
    
       
   
               .. 
 




       
  
Template Sequence  TIYIAGLGLIGASL. ALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAAL. . ADVIILAVPIKKTIDFIK
Template Known Secondary structure 

S.
TTS
SSTTS
SS
TTTTGGG..
S
S
Template Predicted Secondary structure 


.
















..



Template SS confidence 















































































   5....10........ .20.........30.........40.........50.........60... ......70.........80.
 
   84... ..90.........100.........110.........120.....
Predicted Secondary structure  ..















Query SS confidence 



. .





































Query Sequence  RALE. . AGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNR
Query Conservation   

 .. 

 
  


   
  
   
   
        
    
Alig confidence 



..





































Template Conservation             

   


                   
  

 
Template Sequence  ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPX
Template Known Secondary structure  TS


TT



S
TTSS

Template Predicted Secondary structure 



















Template SS confidence 











































   82.......90.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions