Job Description P46853 Confidence 98.99% Date Wed Jan 25 15:20:56 GMT 2012 Rank 81 Aligned Residues 208 % Identity 17% Template c3a14B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: crystal structure of dxr from thermotoga maritima, in complex with2 nadph Resolution 2.00 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure									.																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	C	A	F	I	G	F	.	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	.	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	D	L	D	E	V	L	N	D
Query Conservation									.																											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.								.																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		T	L	V	I	L	G	A	T	G	S	I	G	T	Q	T	.	L	D	V	L	K	K	V	K	G	I	R	L	I	G	I	S	F	H	S	N	L	E	L	A	F	K	I	V	K	E	F	N	V	K	N	V	A	I	T	G	D	V	E	F	E	D	S	S	I	N	V	W	K	G	S	H	S	I	E	E	M	L	E	A
Template Known Secondary structure							T	T	T	S							.									S									S	S												T	T								S	S						S	S	S					S	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G	K	L
Query Conservation
Alig confidence																																		.																											.	.	.	.	.																.
Template Conservation																																		.																											.	.	.	.	.																.
Template Sequence		L	K	P	D	I	T	M	V	A	V	S	G	F	S	G	L	R	A	V	L	A	S	L	E	H	S	K	R	V	C	L	A	.	N	K	E	S	L	V	C	G	G	F	L	V	K	K	K	L	K	E	K	G	T	E	L	I	P	V	.	.	.	.	.	D	S	E	H	S	A	I	F	Q	V	M	E	P	E	V	.
Template Known Secondary structure					S								S	T	T													S						.		S																									.	.	.	.	.	S												T	T		.
Template Predicted Secondary structure																																		.																											.	.	.	.	.																.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	.	R	P	D	H	V	A	Y	D	I	R	S	L	R	N	K	A	N	P	D	D	T
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.																																.										.	.	.	.	.	.	.
Template Conservation		.																																																																				.	.	.	.	.	.	.
Template Sequence		.	E	K	V	V	L	T	A	S	G	G	A	L	R	D	W	K	I	S	K	I	D	R	A	R	P	E	D	V	L	K	M	G	A	R	I	T	V	D	S	A	T	M	V	N	K	A	F	E	V	L	E	A	M	E	L	F	E	L	P	F	E	K	I	E	V	K	I	.	.	.	.	.	.	.	H	R	E	G	L
Template Known Secondary structure		.	S										T	T	T	T	S						T	T																				T															T			G	G	G						.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure		.																																																																				.	.	.	.	.	.	.
Template SS confidence
			157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	A	Q	L	F	Y	G	D	L	K	A	I	V	K	T	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	G	A	V	V	L	P	D	G	N	V	K	M	V	V	S	P
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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