Job Description P46853 Confidence 100.00% Date Wed Jan 25 15:20:56 GMT 2012 Rank 19 Aligned Residues 335 % Identity 15% Template c2q4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase at4g09670; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670 Resolution 2.49 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	.	.	.	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F
Query Conservation																																																	.	.	.
Alig confidence																.																																	.	.	.
Template Conservation																.
Template Sequence		I	R	I	G	V	X	G	C	A	D	I	A	R	K	.	V	S	R	A	I	H	L	A	P	N	A	T	I	S	G	V	A	S	R	S	L	E	K	A	K	A	F	A	T	A	N	N	Y	P	E	S	T	K	I	H	G	S	Y	E	S	L	L	E	D	P	E	I	D	A	L	Y	V	P	L	P	T	S	L	H	V
Template Known Secondary structure								S			T					.						T	T		S	S									S												T	T			T	T	S				S							T		T	T										G	G	G
Template Predicted Secondary structure																.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	.	S	G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	P
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		E	W	A	I	K	A	A	E	K	G	K	H	I	L	L	E	K	P	V	A	X	N	V	T	E	F	D	K	I	V	D	A	C	E	A	N	G	V	Q	I	X	D	G	T	X	W	V	H	N	P	R	T	A	L	L	K	E	F	L	S	D	S	E	R	F	G	Q	L	K	T	V	Q	S	C	F	S	F	A	G	D
Template Known Secondary structure										T	T							S	S			S	S														T	T								G	G	G	T	S													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
								159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.																																.	.
Query SS confidence		.	.	.	.	.	.																																.	.
Query Sequence		.	.	.	.	.	.	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	R	.	.	P	D	H	V	A	Y	D	I	R	S	L	R	N	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	G	D	L	K	A	I	V	K	T	S	H	L	V	K
Query Conservation		.	.	.	.	.	.																																.	.
Alig confidence		.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		E	D	F	L	K	N	D	I	R	V	K	P	G	L	D	G	L	G	A	L	G	D	A	G	W	Y	A	I	R	A	T	L	L	A	N	N	F	E	L	P	K	T	V	T	A	F	P	G	A	V	L	N	E	A	G	V	I	L	S	C	G	A	S	L	S	W	E	D	G	R	T	A	T	I	Y	C	S	F	L	A
Template Known Secondary structure									T	T	T	S	S	S	T	T	T	T	T					T												T	T	T				S						S						T	T	S												S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Y	P	K	F	I	V	H	G	K	K	G	S	F	I	K	Y	G	I	D	Q	Q	E	T	S	L	K	A	N	I	M	P	G	E	P	G	F	A	A	D	D	S	V	G	V	L	E	Y	V	N	D	E	G	V	T	V	R	E	E	M	K	P	E	M	G	D	Y	G	R	V	Y	D	A	L	Y	Q	T	I	T
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		N	L	T	X	E	I	T	A	I	G	T	K	G	T	L	R	V	H	D	F	I	I	.	.	.	.	.	.	P	Y	K	E	T	E	A	S	F	T	T	S	T	K	A	W	F	N	D	L	V	T	A	W	V	S	P	P	S	E	H	T	V	K	T	E	L	P	Q	E	A	C	X	V	R	E	F	A	I	K	N	N
Template Known Secondary structure												S	S						S		S	S	S	.	.	.	.	.	.		S		T	T									S			B		T	T	S	S	S	B	S	S										S	S													T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340		.	.	.	.
Predicted Secondary structure																															.		.
Query SS confidence																															.		.
Query Sequence		H	G	A	P	N	Y	V	K	E	S	E	V	L	T	N	L	E	I	L	E	R	G	F	E	Q	A	S	P	S	.	T	.	V	T	L	A
Query Conservation																															.		.
Alig confidence																															.		.
Template Conservation
Template Sequence		G	A	K	P	D	G	Y	W	P	S	I	S	R	K	T	Q	L	V	V	D	A	V	K	E	S	V	D	K	N	Y	Q	Q	I	S	L	S
Template Known Secondary structure							S																					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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