Job Description P46853 Confidence 98.84% Date Wed Jan 25 15:20:56 GMT 2012 Rank 85 Aligned Residues 209 % Identity 13% Template c2jcyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis Resolution 2.35 Å

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		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																			.	.	.	.	.	.	60
Predicted Secondary structure										.																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	C	A	F	I	G	F	.	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	.	.	.	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	D	L	D	E	V
Query Conservation										.																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.								.																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		L	R	V	V	V	L	G	S	T	G	S	I	G	T	Q	A	.	L	Q	V	I	A	D	N	P	D	R	F	E	V	V	G	L	A	A	G	G	A	H	L	D	T	L	L	R	Q	R	A	Q	T	G	V	T	N	I	A	V	A	D	E	H	A	A	Q	R	V	G	D	I	P	Y	H	G	S	D	A	A	T	R	L
Template Known Secondary structure								S	T	T	S							.								T	T	T										S	S																				S	S											S			S	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S
Query Conservation
Alig confidence																																					.																						.	.	.	.	.	.	.
Template Conservation																																					.																						.	.	.	.	.	.	.
Template Sequence		V	E	Q	T	E	A	D	V	V	L	N	A	L	V	G	A	L	G	L	R	P	T	L	A	A	L	K	T	G	A	R	L	A	L	A	.	N	K	E	S	L	V	A	G	G	S	L	V	L	R	A	A	R	P	G	Q	I	.	.	.	.	.	.	.	V	P	V	N	S	E	H	S	A	L	A	Q	C	L	R	G
Template Known Secondary structure					S			S								G	G	G	G										T	T							.		S					T	T										T	T			.	.	.	.	.	.	.				S										G	G	G
Template Predicted Secondary structure																																					.																						.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query Sequence		G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	.	R	P	D	H	V	A	Y	D	I	R	S
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.										.	.
Template Conservation																																																																																.	.
Template Sequence		G	T	P	D	E	V	A	K	L	V	L	T	A	S	G	G	P	F	R	G	W	S	A	A	D	L	E	H	V	T	P	E	Q	A	G	A	H	P	T	W	S	M	G	P	M	N	T	L	N	S	A	S	L	V	N	K	G	L	Q	V	I	E	T	H	L	L	F	G	I	P	Y	D	R	I	D	V	V	V	.	.
Template Known Secondary structure		S		G	G	G												T	T	T	T							T	T							T	S	S		S	S	S												T																		G	G	G						.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	N	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	G	D	L	K	A	I	V	K	T	S	H
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	H	P	Q	S	I	I	H	S	M	V	T	F	I	D	G	S	T	I	A	Q	A	S	P
Template Known Secondary structure		.	.	.	.	.		T	T										T	T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions