Job Description P46853 Confidence 99.22% Date Wed Jan 25 15:20:56 GMT 2012 Rank 79 Aligned Residues 108 % Identity 13% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y
Query Conservation
Alig confidence																	.																																	.														.
Template Conservation																	.																																	.														.
Template Sequence		K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	.	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	.	I	E	H	V	D	L	L	P	Q	R	V	P	G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A
Template Known Secondary structure											S						.					S				S	S									S		T	T	T	T	T				T	T			.				G	G	G					S	T	T	.	T								S
Template Predicted Secondary structure																	.																																	.														.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.
Predicted Secondary structure										.																.	.	.	.	.	.	.	.	.
Query SS confidence										.																.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	A	L	E	A	G	.	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	.	.	.	.	.	.	.	.	.	A	K	E	L	F	A	L	A
Query Conservation										.																.	.	.	.	.	.	.	.	.
Alig confidence										.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K	E	V	A	V	E	N	V	D	F	L	A	G	L	T	R	L	S
Template Known Secondary structure									T								S	S	S						T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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