Job Description P46853 Confidence 95.16% Date Wed Jan 25 15:20:56 GMT 2012 Rank 420 Aligned Residues 96 % Identity 21% Template c2d4aC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:malate dehydrogenase; PDBTitle: structure of the malate dehydrogenase from aeropyrum pernix Resolution 2.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	.	.	.	.	.	.	.	.	.	.	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																																.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation													.	.																																																						.	.	.
Template Sequence		I	T	I	L	G	A	G	K	V	G	M	.	.	A	T	A	V	M	L	M	M	R	G	Y	D	D	L	L	L	I	A	R	T	P	G	K	P	Q	G	E	A	L	D	L	A	H	A	A	A	E	L	G	V	D	I	R	I	S	G	S	N	S	Y	E	D	M	.	.	.	R	G	S	D	I	V	L	V	T	A	G
Template Known Secondary structure								S					.	.										T		S							S	S	T	T																	T									S		G	G	G	G	.	.	.	T	T		S
Template Predicted Secondary structure													.	.																																																						.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	.	.	G	L	T	V	T	P	Y	Q	N
Query Conservation																																											.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	N	A	N	T	M	A	D	L	A	E	K	I	K	A	Y	A	K	D	A	I	V	V	I	T	T	N
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T																	T	T	S							S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80																				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions