Return to main results Retrieve Phyre Job Id

Job DescriptionP46853
Confidence97.57%DateWed Jan 25 15:20:56 GMT 2012
Rank204Aligned Residues93
% Identity25%Templatec2d2iO_
PDB info PDB header:oxidoreductaseChain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-2 phosphate dehydrogenase from synechococcus sp. complexed3 with nadp+
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20...... ...30.........40.........50.........60.....
Predicted Secondary structure 






..












.............
Query SS confidence 

























. .






































. . . . . . . . . . . . .
Query Sequence  MVINCAFIGFGKSTTRYHLPYVLNRK. . DSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPD. . . . . . . . . . . . .
Query Conservation 
 






 
      
   
    ..    
         
   
             


    .............
Alig confidence 
















.







..






































.............
Template Conservation 
 












 
.

 
       
 




        
 

  

  
     
      
 
 
  
 
   
Template Sequence  MTIRVAINGFGRIGRNF. LRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD
Template Known Secondary structure 



S.T
SS
S
SS
TTT

S
TTTT

Template Predicted Secondary structure 




.

























Template SS confidence 















































































   1........10....... ..20.........30.........40.........50.........60.........70.........
 
   66...70.........80.........90....
Predicted Secondary structure  ............








Query SS confidence  . . . . . . . . . . . .




























Query Sequence  . . . . . . . . . . . . VKLVVVCTHADSHFEYAKRALEAGKNVLV
Query Conservation  ............ 
 
 
 

   
      

  

 
  
Alig confidence  ............




























Template Conservation    
  
 
   






 

       
  

  


 

Template Sequence  RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVL
Template Known Secondary structure  S
GGG

TTTTT


SSS

BTT
S
Template Predicted Secondary structure 






















Template SS confidence 








































   80.........90.........100.........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions