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Job DescriptionP46853
Confidence97.57%DateWed Jan 25 15:20:56 GMT 2012
Rank203Aligned Residues336
% Identity12%Templatec2bhlB_
PDB info PDB header:oxidoreductase (choh(d)-nadp)Chain: B: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose-6-phosphate dehydrogenase2 (deletion variant) complexed with glucose-6-phosphate
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10 .........20.. .......30.........40....... ..
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Query Sequence  CAFIGF. GKSTTRYHLPYV. . . . . . LNRKDSWHVAHIFRRHAKPEEQAPI. . . . . . . . . . . . . . . . . . . . . . . . . . . . YS
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Template Sequence  FIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYD
Template Known Secondary structure  TTTSTTT
S
SSSS


GGGS


GGGT

SS
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   50.........60....... ..70.........80.........90. ........100.........110..... .
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Query Sequence  HIHFTSDLDEVLNDPDVK. . . . . LVVVCTHADSHFEYAKRALEAGKN. . . . . . VLVEKPFTPTLAQAKELFALAKSK. . G
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Template Sequence  DAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFRE
Template Known Secondary structure 
TTTTTTS
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TS

SSS

S


SSS
G
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   117..120.........130.........140... ......150.........160.........170...... ...180.......
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Query Sequence  LTVTPYQNRRFDSCFLTAKKAIESGKL. . . . . . . GEIVEVESHFDYYRPVAETKPGLPQDGAFYGLG. VHTMDQIISLF.
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Template Sequence  DQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAM
Template Known Secondary structure  GG

GGGGSS
STTSTTSSTTT
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S
TTTTTTT
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   188.190.. ....... 200.........210..... ....220
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Query Sequence  GRPDH. . . . . . . . . . . . . . . . . . . . . . . . . VAYDIRS. . . . . . . . . . . . . . . . . LRNKANPDDTFEAQLF. . . . . YGDLK
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Template Sequence  EKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVP
Template Known Secondary structure 


SSS
TTB



TTS

TTS
GGGG

STT
TTS
TT



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STTTTT
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   221........230.........240.........250.........260...... ...270.........280.........290....
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Query Sequence  AIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEP. . . . . . GFAADDSVGVLEYVNDEGVTVREEMKPE
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Template Sequence  FILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKL
Template Known Secondary structure  SSBSS



SS
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SS

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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   295....300.........310.........320.........330.........340...
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Query Sequence  MGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTL
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Template Sequence  PDAYERLI. . . LDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKP
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TTSB
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   434.....440. ........450.........460.........470.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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