Job Description P46853 Confidence 100.00% Date Wed Jan 25 15:20:56 GMT 2012 Rank 20 Aligned Residues 310 % Identity 20% Template c1zh8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		V	I	N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	.	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		K	I	R	L	G	I	V	G	C	G	I	A	A	R	E	L	H	L	P	A	L	K	N	L	S	H	L	F	E	I	T	A	V	T	S	R	T	R	S	H	A	E	E	F	A	K	X	V	G	N	P	A	V	F	D	S	Y	E	E	L	L	E	S	G	L	V	D	A	V	D	L	T	L	P	V	E	L	N	L	P
Template Known Secondary structure											S						T							T	T	T	T	T									S	S												S	S					S							T	T	T			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A	K	K	A	I	E	S	G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	P	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		F	I	E	K	A	L	R	K	G	V	H	V	I	C	E	K	P	I	S	T	D	V	E	T	G	K	K	V	V	E	L	S	E	K	S	E	K	T	V	Y	I	A	E	N	F	R	H	V	P	A	F	W	K	A	K	E	L	V	E	S	G	A	I	G	D	P	V	F	X	N	W	Q	I	W	V	G	X	D	E	N
Template Known Secondary structure								T	T	T							S	S	S	S	S	S														S	S	S							G	G	G	G													T	T	T	T	S	S										B				T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
							159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M	D	Q	I	I	S	L	F	G	R	P	D	H	V	A	Y	D	I	R	S	L	R	N	K	A	N	P	D	D	T	F	E	A	Q	L	F	Y	G	D	L	K	A	I	V	K	T	S	H	L	V	K	I	D	Y
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		N	K	Y	V	H	T	D	W	R	K	K	P	K	H	V	G	G	F	L	S	D	G	G	V	H	H	A	A	A	X	R	L	I	L	G	E	I	E	W	I	S	A	V	A	K	D	L	S	P	L	L	G	G	X	D	F	L	S	S	I	F	E	F	E	N	G	T	V	G	N	Y	T	I	S	Y	S	L	K	G	N
Template Known Secondary structure			S	G	G	G						T	T		S	T	T	T																																S	S	S	S	S											T	T	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	F	I	V	H	G	K	K	G	S	F	I	K	Y	G	I	D	Q	Q	E	T	S	L	K	A	N	I	M	P	G	E	P	G	F	A	A	D	D	S	V	G	V	L	E	Y	V	N	D	E	G	V	T	V	R	E	E	M	K	P	E	M	G	D	Y	G	R	V	Y	D	A	L	Y	Q	T	I	T	H	G	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	F	E	I	T	G	T	K	G	K	I	S	I	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	I	V	L	N	E	E	E	X	K	V	P	Q	E	N	S	Y	Q	K	E	F	E	D	F	Y	Q	V	V	A	E	G	K
Template Known Secondary structure									S	S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T																							T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																																.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		314	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.
Predicted Secondary structure					.																									.
Query SS confidence					.																									.
Query Sequence		P	N	Y	.	V	K	E	S	E	V	L	T	N	L	E	I	L	E	R	G	F	E	Q	A	S	P	S	T	.	V	T
Query Conservation					.																									.
Alig confidence					.																									.
Template Conservation
Template Sequence		P	N	D	L	G	S	P	V	Q	A	L	K	D	L	A	F	I	E	A	C	V	R	S	A	G	N	K	V	F	V	S
Template Known Secondary structure				S	S	S																			T	T	S				G	G
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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