Job Description P46853 Confidence 98.73% Date Wed Jan 25 15:20:56 GMT 2012 Rank 90 Aligned Residues 158 % Identity 16% Template c1r0lD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate reductoisomerase from2 zymomonas mobilis in complex with nadph Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.
Predicted Secondary structure											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		V	I	N	C	A	F	I	G	F	.	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	I	Y	S	H	I	.	.	H	F	T	S	D
Query Conservation											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence											.								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																			.
Template Sequence		P	R	T	V	T	V	L	G	A	T	G	S	I	G	H	S	T	.	L	D	L	I	E	R	N	L	D	R	Y	Q	V	I	A	L	T	A	N	R	N	V	K	D	L	A	D	A	A	K	R	T	N	A	K	R	A	V	I	A	D	P	S	L	Y	N	D	L	K	E	A	L	A	G	S	S	V	E	A	A	A	G
Template Known Secondary structure									T	T	T	S							.							T	T	T	T									S	S													T		S					S		G	G	G								T	T	T		S						S
Template Predicted Secondary structure																			.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		57	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		L	D	E	V	L	N	.	.	D	P	D	V	K	L	V	V	V	C	T	H	A	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S	C	F	L	T	A
Query Conservation								.	.
Alig confidence								.	.																																		.																											.	.	.	.	.
Template Conservation																																											.																											.	.	.	.	.
Template Sequence		A	D	A	L	V	E	A	A	M	M	G	A	D	W	T	M	A	A	I	I	G	C	A	G	L	K	A	T	L	A	A	I	R	K	G	K	T	V	A	L	A	.	N	K	E	S	L	V	S	A	G	G	L	M	I	D	A	V	R	E	H	G	T	T	L	L	P	V	.	.	.	.	.	D	S	E	H	N	A	I
Template Known Secondary structure										T	S			S								S	G	G	G										T	T	S						.		T																		T							.	.	.	.	.	S
Template Predicted Secondary structure																																											.																											.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	I	E	S	G	K	L	G	E	I	V	E	V	E	S	H	F	D	Y	Y	R	P	V	A	E	T	K	P	G	L	P	Q	D	G	A	F	Y	G	L	G	V	H	T	M
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	C	F	P	H	H	N	R	D	Y	V	R	R	I	I	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	G	P	F	R	T	T	S	L	A	E	M
Template Known Secondary structure							T	T		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.															.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions