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Job DescriptionP46853
Confidence97.18%DateWed Jan 25 15:20:56 GMT 2012
Rank230Aligned Residues336
% Identity14%Templatec1qkiE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:glucose-6-phosphate 1-dehydrogenase; PDBTitle: x-ray structure of human glucose 6-phosphate dehydrogenase2 (variant canton r459l) complexed with structural nadp+
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  CAFIGF. GKSTTRYHLPYVL. . . . . . NRKDSWHVAHIFR. . . . . . . . . . . . . . . . . . . . . RHAKPEEQAPI. . . . . . . YS
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Template Sequence  FIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYD
Template Known Secondary structure  TTTSTTT
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SSS

S
TTTTTTTS

TT

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SS
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   50.........60....... ..70.........80.........90. ........100.........110..... .
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Query Sequence  HIHFTSDLDEVLNDPDVK. . . . . LVVVCTHADSHFEYAKRALEAGKN. . . . . . VLVEKPFTPTLAQAKELFALAKSK. . G
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Template Sequence  DAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFRE
Template Known Secondary structure 
TTTTTTS
S
T

SSS

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SSSS
G
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   117..120.........130.........140... ......150.........160.........170...... ...180.......
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Query Sequence  LTVTPYQNRRFDSCFLTAKKAIESGKL. . . . . . . GEIVEVESHFDYYRPVAETKPGLPQDGAFYGLG. VHTMDQIISLF.
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Template Sequence  DQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAM
Template Known Secondary structure  GG

GGGGSS
STTTTTSSTTT
SS


S
TTTTTTT
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   194.....200.........210.........220.........230.........240.........250.........260.........270...
 
   188.190.. .......200. ........210..... ....220
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Query Sequence  GRPDH. . . . . . . . . . . . . . . . . . . . . . . . . VAYDIRSLR. . . . . . . . . . . . . . . . . NKANPDDTFEAQLF. . . . . YGDLK
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Template Sequence  EKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVP
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SSS
TTB



GGG

TTS
GGGG

STTSTTS
TT



SB
STTTTT
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   221........230.........240.........250.........260...... ...270.........280.........290....
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Query Sequence  AIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEP. . . . . . GFAADDSVGVLEYVNDEGVTVREEMKPE
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Template Sequence  FILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKL
Template Known Secondary structure  SS
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   354.....360.........370.........380.........390.........400.........410.........420.........430...
 
   295....300.........310.........320.........330.........340...
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Query Sequence  MGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTL
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Template Sequence  PDAYERL. . . ILDVFCGSQMHFVRSDELLEAWRIFTPLLHQIELEKPKP
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GGGSB




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   434.....440 .........450.........460.........470.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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