Job Description P46853 Confidence 97.77% Date Wed Jan 25 15:20:56 GMT 2012 Rank 178 Aligned Residues 121 % Identity 14% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	C	A	F	I	G	F	G	K	S	T	T	R	Y	H	L	P	Y	V	L	N	R	K	D	S	W	H	V	A	H	I	F	R	R	H	A	K	P	E	E	Q	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	S	H	I	H	F	T	S	D	L	D	E	V	L	N	D	P	D
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																.								.	.																																																							.	.
Template Sequence		R	I	S	I	F	G	L	G	Y	V	G	A	V	C	.	A	G	C	L	S	A	R	.	.	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	.	.
Template Known Secondary structure									S	T	T					.							T	.	.	T								S										T	T			S	S			T	T											T	T						S								T	.	.
Template Predicted Secondary structure																.								.	.																																																							.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.														.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		V	K	L	V	V	V	C	T	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	H	F	E	Y	A	K	R	A	L	E	A	G	K	.	.	.	N	V	L	V	E	K	P	F	T	P	T	L	A	Q	A	K	E	L	F	A	L	A	K	S	K	G	L	T	V	T	P	Y	Q	N	R	R	F	D	S
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		S	D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E	D	C	S	G	K	K	A	G	V	D	F	G	V	G	T	N	P
Template Known Secondary structure			S										B		T	T	S	S	B																	T	T			S								S				T	T					T										S			B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions