Return to main results Retrieve Phyre Job Id

Job DescriptionP46853
Confidence94.89%DateWed Jan 25 15:20:56 GMT 2012
Rank432Aligned Residues102
% Identity17%Templatec1hygA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate/malate dehydrogenase; PDBTitle: crystal structure of mj0490 gene product, the family of2 lactate/malate dehydrogenase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10 .........20.........30......... 40....... ..50... ......60.........70
Predicted Secondary structure 

.






..........


.







Query SS confidence 







.




























. .







. . . . . . . .





.
















Query Sequence  INCAFIGF. GKSTTRYHLPYVLNRKDSWHVAHIFRRHA. . KPEEQAPI. . . . . . . . YSHIHF. TSDLDEVLNDPDVKLVV
Query Conservation 






 .
      
   
        
        .. 
   
  ........      .     


     
 
 
Alig confidence 







.






.




















..







........





.
















Template Conservation 


 



 
 

   .
  
       

 
 
             

            
         

  




Template Sequence  MKVTIIGASGRVGSAT. ALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVI
Template Known Secondary structure 
TTTS.STT


GGGTTS



TT
GGGGTT
S
Template Predicted Secondary structure 




.























Template SS confidence 















































































   1........10...... ...20.........30.........40.........50.........60.........70.........
 
   71. .......80.........90.........100.........110.........120.
Predicted Secondary structure 
.....















Query SS confidence 

. . . . .
















































Query Sequence  VC. . . . . THADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTP
Query Conservation 
 .....

   
      

  

 
  


   
  
   
   
        
Alig confidence 

.....










................





















Template Conservation 



        
  
  ................ 
  
       
       

Template Sequence  ITSGVPRKEGMSRMDLAK. . . . . . . . . . . . . . . . TNAKIVGKYAKKIAEICDTKIF
Template Known Secondary structure 






SS

................


Template Predicted Secondary structure 










................



Template SS confidence 























































   80.........90....... ..100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions