Return to main results Retrieve Phyre Job Id

Job DescriptionP46853
Confidence97.55%DateWed Jan 25 15:20:56 GMT 2012
Rank205Aligned Residues108
% Identity13%Templatec1dliA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.... .....50.........60.......
Predicted Secondary structure 








................










Query SS confidence 








































. . . . . . . . . . . . . . . .






















Query Sequence  NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ. . . . . . . . . . . . . . . . APIYSHIHFTSDLDEVLNDPDVK
Query Conservation 





 
      
   
        
         
   ................
             


     
Alig confidence 













.





.

..














................


















..

Template Conservation 

 









 .
  

 .
 .. 
 
 
     

 
  
  
  
  
             
         ..

Template Sequence  KIAVAGSGYVGLSL. GVLLSL. QN. . EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKE. . AE
Template Known Secondary structure 

S.TT.TS..
S
TT

SS

S


S
..
S
Template Predicted Secondary structure 

..

..




















..

Template SS confidence 















































































   2.......10..... ....20. .. ......30.........40.........50.........60.........70... ..
 
   68.70.........80 .........90.........100.........110.........
Predicted Secondary structure 


.............













Query SS confidence 












. . . . . . . . . . . . .






































Query Sequence  LVVVCTHADSHFE. . . . . . . . . . . . . YAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTV
Query Conservation   
 
 

   
  .............    

  

 
  


   
  
   
   
       
Alig confidence 












.............





















..














Template Conservation 



 



        
   
      
     
  

  


 


..
  
   
       
Template Sequence  LVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGF. . ITEMRQKFQTDRIIF
Template Known Secondary structure 




TTTT


SS

S


TT..T
S
Template Predicted Secondary structure 


















..




Template SS confidence 
































































   76...80.........90.........100.........110.........120... ......130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions