Job Description P36645 Confidence 100.00% Date Thu Jan 5 11:53:22 GMT 2012 Rank 1 Aligned Residues 371 % Identity 43% Template d1p9ra_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Resolution 2.50

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	H	Q	P	K	A	E	L	L	T	R	T	L	Q	S	A	L	E	Q	R	A	S	D	I	H	I	E	P	A	D	N	A	Y	R	I	R	L	R	I	D	G	V	L	H	P	L	P	D	V	S	P	D	A	G	V	A	L	T	A	R	L	K	V	L	G	N	L	D	I	A	E	H	R	L	P	Q	D	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	A	P	I	I	K	L	I	N	A	X	L	G	E	A	I	K	E	G	A	S	D	I	H	I	E	T	F	E	K	T	L	S	I	R	F	R	V	D	G	V	L	R	E	V	L	A	P	S	R	K	L	S	S	L	L	V	S	R	V	K	V	X	A	K	L	D	I	A	E	K	R	V	P	Q	D	G	R
Template Known Secondary structure																						T		S								T	T									T	T										G	G	G												T	T			T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	V	E	L	A	G	N	A	V	S	F	R	I	A	T	L	P	C	R	G	G	E	K	V	V	L	R	L	L	Q	Q	V	G	Q	A	L	D	V	N	T	L	G	M	Q	P	L	Q	L	A	D	F	A	H	A	L	Q	Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		I	S	L	A	.	.	.	.	.	V	D	V	R	V	S	T	X	P	S	S	H	G	E	R	V	V	X	R	L	L	D	K	N	A	T	R	L	D	L	H	S	L	G	X	T	A	H	N	H	D	N	F	R	R	L	I	K	R	P	H	G	I	I	L	V	T	G	P	T	G	S	G	K	S	T	T	L	Y	A	G
Template Known Secondary structure						.	.	.	.	.											T	T	S										T	T	T	T				G	G	G	S															T	S	S	S								S	T	T	S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		198	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	K	L	N	T	A	D	I	N	I	C	S	V	E	D	P	V	E	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	G	L	T	F	Q	G	V	L	R	A	L	L	R	Q	D	P	D	V	I	M	I	G	E	I	R	D	G	E	T	A	E	I	A	I	K	A	A	Q	T	G	H	L	V	L	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	E	L	N	S	S	E	R	N	I	L	T	V	E	D	P	I	E	F	D	I	D	G	I	G	Q	T	Q	V	N	P	R	V	D	X	T	F	A	R	G	L	R	A	I	L	R	Q	D	P	D	V	V	X	V	G	E	I	R	D	L	E	T	A	Q	I	A	V	Q	A	S	L	T	G	H	L	V	X	S	T
Template Known Secondary structure								T	T	S							S	S			S			S	S	S						B	G	G	G	T	B										G	G	G			S					S				S													T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		L	H	T	N	S	T	C	E	T	L	V	R	L	Q	Q	M	G	V	A	R	W	M	L	S	S	A	L	T	L	V	I	A	Q	R	L	V	R	K	L	C	P	H	C	R	R	Q	Q	G	E	P	I	H	I	P	D	N	V	W	P	S	P	L	P	H	W	Q	A	P	G	C	V	H	C	.	Y	H	G	F	Y	G
Query Conservation																																																																											.
Alig confidence																																																											.	.															.
Template Conservation																																																											.	.
Template Sequence		L	H	T	N	T	A	V	G	A	V	T	R	L	R	D	X	G	I	E	P	F	L	I	S	S	S	L	L	G	V	L	A	Q	R	L	V	R	T	L	C	P	D	C	K	E	P	Y	E	A	D	K	E	Q	R	K	L	F	.	.	E	P	L	I	L	Y	R	A	T	G	C	P	K	C	N	H	K	G	Y	R	G
Template Known Secondary structure					S	S	S											T																								T	T	T												T	T		.	.												S	S	S		S	S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	L	F	E	V	L	P	I	T	P	V	I	R	Q	L	I	S	A	N	T	D	V	E	S	L	E	T	H	A	R	Q	A	G	M	R	T	L	F	E	N	G	C	L	A	V	E	Q	G	L	T	T	F	E	E	L	I	R	V
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		R	T	G	I	H	E	L	L	L	V	D	D	A	L	Q	E	L	I	H	S	E	A	G	E	Q	A	X	E	K	H	I	R	A	.	T	T	P	S	I	R	D	D	G	L	D	K	V	R	Q	G	I	T	S	L	E	E	V	X	R	G
Template Known Secondary structure																					T	T												T	.	T														T	T	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions