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Job DescriptionP36645
Confidence94.60%DateThu Jan 5 11:53:22 GMT 2012
Rank466Aligned Residues93
% Identity20%Templatec3zvmA_
PDB info PDB header:hydrolase/transferase/dnaChain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  LVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDG
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Template Sequence  VVVAVGFPGAGKSTFIQEHLV. . . . . . . . . . . . . . . . SAGYVHVNRDTLGSWQ. . RCVSSCQAALRQGKRVVIDNTNPDV
Template Known Secondary structure 

TTSSTG................GGT

S..TT

S


S
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   366...370.........380...... ...390.........400.. .......410.........420.......
 
   297..300.........310.........320.......
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Query Sequence  ETAEIAIKAAQTGHLVLSTLHTNSTCETLVR
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Template Sequence  PSRARYIQCAKDAGVPCRCFNFCATIEQARH
Template Known Secondary structure  T




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   428.430.........440.........450........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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