Job Description P36645 Confidence 100.00% Date Thu Jan 5 11:53:22 GMT 2012 Rank 3 Aligned Residues 315 % Identity 35% Template c3jvvA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp Resolution 2.60 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	T	R	T	L	Q	S	A	L	E	Q	R	A	S	D	I	H	I	E	P	A	D	N	A	Y	R	I	R	L	R	I	D	G	V	L	H	P	L	P	D	.	.	V	S	P	D	A	G	V	A	L	T	A	R	L	K	V	L	G	N	L	D	I	A	E	H	R	L	P	Q	D	G	Q	F	T	V	E	L	A	G
Query Conservation																																										.	.
Alig confidence																									.	.	.															.	.
Template Conservation																									.	.	.
Template Sequence		I	T	E	L	L	A	F	S	A	K	Q	G	A	S	D	L	H	L	S	A	G	L	P	.	.	.	P	M	I	R	V	D	G	D	V	R	R	I	N	L	P	P	L	E	H	K	Q	V	H	A	L	I	Y	D	I	M	N	D	K	Q	R	K	D	F	E	E	F	L	E	T	D	F	S	F	E	V	P	G	V	A
Template Known Secondary structure												T	T		S						T	T	B		.	.	.						T	T						S	S			B																									S									T	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	A	V	S	F	R	I	A	T	L	P	C	R	G	G	E	K	V	V	L	R	L	L	Q	Q	V	G	Q	A	L	D	V	N	T	L	G	M	Q	P	L	Q	L	A	D	F	A	H	A	L	Q	Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	.
Query Conservation																																																																																	.
Alig confidence			.	.	.																					.	.														.	.	.	.																																					.
Template Conservation			.	.	.																					.	.														.	.	.	.
Template Sequence		R	.	.	.	F	R	V	N	A	F	N	Q	N	R	G	A	G	A	V	F	R	T	I	P	.	.	S	K	V	L	T	M	E	E	L	G	M	G	E	.	.	.	.	V	F	K	R	V	S	D	V	P	R	G	L	V	L	V	T	G	P	T	G	S	G	K	S	T	T	L	A	A	M	L	D	Y	L	N	N	T
Template Known Secondary structure			.	.	.									T	T											.	.		S				T	T	T	T	T				.	.	.	.									S	S								S	T	T	S
Template Predicted Secondary structure			.	.	.																					.	.														.	.	.	.
Template SS confidence
		80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		A	D	I	N	I	C	S	V	E	D	P	V	E	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	G	.	.	.	L	T	F	Q	G	V	L	R	A	L	L	R	Q	D	P	D	V	I	M	I	G	E	I	R	D	G	E	T	A	E	I	A	I	K	A	A	Q	T	G	H	L	V	L	S	T	L	H	T
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		K	Y	H	H	I	L	T	I	E	D	P	I	E	F	V	H	E	S	K	K	C	L	V	N	Q	R	E	V	H	R	D	T	L	G	F	S	E	A	L	R	S	A	L	R	E	D	P	D	I	I	L	V	G	E	M	R	D	L	E	T	I	R	L	A	L	T	A	A	E	T	G	H	L	V	F	G	T	L	H	T
Template Known Secondary structure											S	S			S					S	S	S							B	T	T	T	B	S										T	T	S			S					S				S													T	T								S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		319	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		N	S	T	C	E	T	L	V	R	L	Q	Q	M	.	.	.	.	.	.	G	V	A	R	W	M	L	S	S	A	L	T	L	V	I	A	Q	R	L	V	R	K	L	C	P	H	C	R	R	Q	Q	G	E	P	I	H	I	P	D	N	V	W	P	S	P	L	P	H	W	Q	A	P	G	C	V	H	C	Y	H	G	F
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	A	A	K	T	I	D	R	V	V	D	V	F	P	A	E	E	K	A	M	V	R	S	M	L	S	E	S	L	Q	S	V	I	S	Q	T	L	I	K	K	R	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S											T	S																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		Y	G	R	T	A	L	F	E	V	L	P	I	T	P	V	I	R	Q	L	I	S	A	N	T	D	V	.	.	E	S	L	E	T	H	A	R	Q	A	G	M	R	T	L	F	E	N	G	C	L	A	V	E	Q	G	L	T	T	F	E	E	L	I	R	V	L	G	M	P	H
Query Conservation																												.	.
Alig confidence		.	.	.	.	.																						.	.																				.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																											.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	H	E	I	M	I	G	T	P	A	I	R	N	L	I	R	E	D	K	V	A	Q	M	Y	S	A	I	Q	T	G	G	S	L	G	M	Q	T	L	D	M	C	L	.	.	.	.	.	.	.	K	G	S	R	E	N	A	R	E	K	A	K	I	P	E
Template Known Secondary structure		.	.	.	.	.																		T		G	G	G							T		G	G	G	T		B							.	.	.	.	.	.	.	T									T		S	S
Template Predicted Secondary structure		.	.	.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
							279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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