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Job DescriptionP36645
Confidence97.52%DateThu Jan 5 11:53:22 GMT 2012
Rank33Aligned Residues91
% Identity18%Templatec3eihB_
PDB info PDB header:protein transportChain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210. ........220.........230.........240.........250.........
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Query Sequence  DVNTLGMQPLQLADFAHAL. . . . . . . . . . . . . QQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAG
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Template Sequence  KWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEA. . . NSTFFSVSSSDLVSK. .
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   131........140.........150.........160.........170.........180.........190 .........200.....
 
   260.........270.........280.........290...
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Query Sequence  LNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEI
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Template Sequence  . . . . . WMGESEKLVKQLFAMARENKPSIIFIDQV
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TTTTTSSSG
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   206...210.........220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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