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Job DescriptionP36645
Confidence97.71%DateThu Jan 5 11:53:22 GMT 2012
Rank24Aligned Residues116
% Identity16%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVE. DP. . . . . . . . . . VEIPIAGLNQTQIHPRAGLTFQGVLRALL
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Template Sequence  EKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGA. . DPAAVAYDAI
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   121........130.........140.........150.........160.........170.........180........ .190........
 
   282 ....... 290.........300......... 310.........320.........330
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Query Sequence  R. . . . QDPDVIM. . . . . . . IGEIRDGETAEIAIKAAQTG. . HLVLSTLHTNSTCETLVRLQQ
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Template Sequence  QHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNE
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   199200.........210.........220.........230.........240.........250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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