Job Description P36645 Confidence 97.75% Date Thu Jan 5 11:53:22 GMT 2012 Rank 22 Aligned Residues 118 % Identity 17% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.						.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280
Predicted Secondary structure																																								.			.	.	.	.	.			.	.	.	.	.																			.
Query SS confidence																																								.			.	.	.	.	.			.	.	.	.	.																			.
Query Sequence		Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	A	D	I	N	I	C	S	V	E	.	D	P	.	.	.	.	.	V	E	.	.	.	.	.	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	G	L	T	.	F	Q	G	V	L	R	A	L
Query Conservation																																								.			.	.	.	.	.			.	.	.	.	.																			.
Alig confidence																																								.			.	.	.	.	.			.	.	.	.	.																			.
Template Conservation
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G
Template Known Secondary structure		S	S										T	T	S																T	T											S																T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		281	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.												310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	Q	D	P	D	V	I	M	I	G	E	I	.	.	.	.	R	D	G	E	T	A	E	I	A	I	K	A	A	Q	T	G	.	.	.	.	.	.	.	.	.	.	.	H	L	V	L	S	T	L	H	T	N	S	T	C	E	T	L	V	R	L	Q	Q
Query Conservation															.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E
Template Known Secondary structure				T	T		S										S	S																		T	T	S	T	T			S								G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions