Return to main results Retrieve Phyre Job Id

Job DescriptionP36645
Confidence97.50%DateThu Jan 5 11:53:22 GMT 2012
Rank36Aligned Residues110
% Identity14%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270.........280.........290......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDG
Query Conservation 



 










 
 
         
 






    
  
  
    
 
    

  

 




 





 
Alig confidence 





















































.
























Template Conservation 

 
 
  






   
        
 
                        .                         
Template Sequence  LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIK. KSTYRLIDSALKNYWVIVDDTNYYN
Template Known Secondary structure 

TTSSTT


TTTSSS

TT.TTS
S


S
Template Predicted Secondary structure 













.






Template SS confidence 















































































   6...10.........20.........30.........40.........50......... 60.........70.........80....
 
   297..300.........310.........320.......
Predicted Secondary structure 






Query SS confidence 






























Query Sequence  ETAEIAIKAAQTGHLVLSTLHTNSTCETLVR
Query Conservation 


  
  

 




 




  
   
 
Alig confidence 






























Template Conservation                                 
Template Sequence  SMRRDLINIAKKYNKNYAIIYLKASLDVLIR
Template Known Secondary structure  TT


Template Predicted Secondary structure 







Template SS confidence 






























   85....90.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions