Return to main results Retrieve Phyre Job Id

Job DescriptionP36645
Confidence96.03%DateThu Jan 5 11:53:22 GMT 2012
Rank246Aligned Residues112
% Identity14%Templatec2qorA_
PDB info PDB header:transferaseChain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of plasmodium vivax guanylate kinase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.. .......250.........260.........270......
Predicted Secondary structure 









..















..................
Query SS confidence 

























. .

































. . . . . . . . . . . . . . . . . .
Query Sequence  LVLVTGPTGSGKTVTLYSALQKLNTA. . DINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGV. . . . . . . . . . . . . . . . . .
Query Conservation 



 










 
 
      ..   
 






    
  
  
    
 
    ..................
Alig confidence 

























..

























...




..................
Template Conservation 



 

 
 




   
       
      


  
  
  
  
 

   ... 
        


     
  

Template Sequence  PLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKD. . . DFERKLKEGQFLEFDKYANNFYG
Template Known Secondary structure 


TTS

TTT


S


TT

BTTT

...TT
TT
Template Predicted Secondary structure 

























...








Template SS confidence 















































































   6...10.........20.........30.........40.........50......... 60.........70.........80..
 
   277..280.........290.........300.........310.........320.........330....
Predicted Secondary structure  .....



















Query SS confidence  . . . . .

























































Query Sequence  . . . . . LRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVA
Query Conservation  .....

  

 




 





 


  
  

 




 




  
   
 

   
  
Alig confidence  .....
















...





































Template Conservation       
          
     ...     
           
     
   
  

  
   
Template Sequence  TLKSEYDLAVGEGKICLFEXNI. . . NGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTE
Template Known Secondary structure  TT


...
SS
S


S
T
TTS
Template Predicted Secondary structure 





...












Template SS confidence 






























































   83......90.........100.... .....110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions