Job Description P36645 Confidence 99.84% Date Thu Jan 5 11:53:22 GMT 2012 Rank 8 Aligned Residues 165 % Identity 18% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		A	L	Q	Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	A	D	I	N	I	C	S	V	E	D	P	V	E	I	P	I	A	G	L	N	Q	T	Q	I	H	.	.	.	.	.	P	R	A	G	L	T	F	Q	G	V	L	R	A	L	L	R	Q	D
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																		.									.	.	.	.	.
Template Conservation																																																		.
Template Sequence		L	I	N	Q	N	G	W	I	E	V	I	C	G	S	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	Q	F	A	K	Q	H	A	I	V	F	K	P	C	I	D	N	R	Y	.	S	E	E	D	V	V	S	H	N	G	L	K	V	K	A	V	P	V	S	A	S	K	D	I	F	E	H	I	T	E	E
Template Known Secondary structure															S	T	T	S	S															T	T									T	T			S	S	.		S	S					T	T	S									S	S	G	G	G	G	G	G	G			S	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		285	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																			.	.	.	.
Query SS confidence												.	.																			.	.	.	.
Query Sequence		P	D	V	I	M	I	G	E	I	R	.	.	D	G	E	T	A	E	I	A	I	K	A	A	Q	T	G	H	L	V	.	.	.	.	L	S	T	L	H	T	N	S	T	C	E	T	L	V	R	L	Q	Q	M	G	V	A	R	W	M	L	S	S	A	L	T	L	V	I	A	Q	R	L	V	R	K	L	C	P	H	C
Query Conservation												.	.																			.	.	.	.
Alig confidence												.	.																			.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	V	I	A	I	D	E	V	Q	F	F	D	G	D	I	V	E	V	V	Q	V	L	A	N	R	G	Y	R	V	I	V	A	G	L	D	Q	D	F	R	G	L	P	F	G	Q	V	P	Q	L	M	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	V	T	K	L	Q	A	V	C	S	V	C
Template Known Secondary structure								S	S	G	G	G	S		T	T											T	T									S	B		T	T	S		B		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	S								B		T	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.										.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		R	R	Q	Q	G	E	P	I	H	I	.	.	.	.	.	.	.	.	.	P	D	N	V	W	P	S	P	L	P	H	W	Q	A	P	G	C	V	H	C	Y
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																.
Template Conservation																																				.
Template Sequence		G	S	P	A	S	R	T	Q	R	L	I	D	G	E	P	A	A	F	D	D	P	I	I	L	V	G	A	S	E	S	Y	E	P	R	.	C	R	H	C	H
Template Known Secondary structure			S	B									T	T					T	T			S			T	T									.		T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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