Job Description P36645 Confidence 100.00% Date Thu Jan 5 11:53:22 GMT 2012 Rank 7 Aligned Residues 236 % Identity 20% Template c2gzaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:type iv secretion system protein virb11; PDBTitle: crystal structure of the virb11 atpase from the brucella suis type iv2 secretion system in complex with sulphate Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	T	L	Q	S	A	L	E	Q	R	A	S	D	I	H	I	E	P	A	D	N	A	Y	R	I	R	L	R	I	D	G	V	L	H	P	L	P	D	V	S	P	D	A	G	V	A	L	T	A	R	L	K	V	L	G	N	L	D	I	A	E	H	R	L	P	Q	D	G	Q	F	T	V	E	L	A	G	N	A
Query Conservation
Alig confidence									.	.	.												.																																																				.	.	.	.	.
Template Conservation									.	.	.												.																																																				.	.	.	.	.
Template Sequence		L	R	P	W	L	D	D	.	.	.	P	Q	I	T	E	V	C	V	N	R	P	.	G	E	V	F	C	E	R	A	S	A	W	E	Y	Y	A	V	P	N	L	D	Y	E	H	L	I	S	L	G	T	A	T	A	R	F	V	D	Q	D	I	S	D	S	R	P	V	L	S	A	I	L	P	.	.	.	.	.	M	G
Template Known Secondary structure		G					S		.	.	.	T	T							S	S	T	.	T							T	T								T	T																	T	T				S	T	T	S								T	.	.	.	.	.	T	S
Template Predicted Secondary structure									.	.	.												.																																																				.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																										.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	F	R	I	A	T	L	P	C	R	G	G	E	K	V	V	L	R	L	L	Q	Q	V	G	Q	A	L	D	V	N	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	Q	P	L	Q	L	A	D	F	A	H	A	L	Q	Q	P	Q	G	L	V	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	I	Q	I	V	R	P	P	A	C	E	H	G	T	I	S	V	T	I	R	K	P	S	F	T	R	R	T	L	E	D	Y	A	Q	Q	G	F	F	K	H	V	R	P	M	S	K	S	L	T	P	F	E	Q	E	L	L	A	L	K	E	A	G	D	Y	M	S	F	L	R	R	A	V	Q	L	E	R	V	I	V
Template Known Secondary structure									T	T	T	B		T	T																						T	T	S	S	T	T						T	T															T												T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	A	D	I	N	I	C	S	V	E	D	P	V	E	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	G	L	T	F	Q	G	V	L	R	A	L	L	R	Q	D	P	D	V	I	M	I	G	E	I	R	D	G	E	T	A
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		V	A	G	E	T	G	S	G	K	T	T	L	M	K	A	L	M	Q	E	I	P	.	F	D	Q	R	L	I	T	I	E	D	V	P	E	L	F	L	P	D	H	P	N	H	V	H	L	F	Y	P	P	V	T	A	A	T	L	L	R	S	C	L	R	M	K	P	T	R	I	L	L	A	E	L	R	G	G	E	A	Y
Template Known Secondary structure					S	T	T	S	S										T	T	S		.	T	T	S							S	S	S					T	T		S	S																			T	T	S			S					S				S	T
Template Predicted Secondary structure																							.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	I	A	I	K	A	A	Q	T	G	H	L	.	V	L	S	T	L	H	T	N	S	T	C	E	T	L	V	R	L	Q	Q	M
Query Conservation														.
Alig confidence			.											.
Template Conservation			.
Template Sequence		D	.	F	I	N	V	A	A	S	G	H	G	G	S	I	T	S	C	H	A	G	S	C	E	L	T	F	E	R	L	A	L	M
Template Known Secondary structure			.							T	T											S	S
Template Predicted Secondary structure			.
Template SS confidence
		268		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions