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Job DescriptionP36645
Confidence100.00%DateThu Jan 5 11:53:22 GMT 2012
Rank5Aligned Residues227
% Identity37%Templatec2eyuA_
PDB info PDB header:protein transportChain: A: PDB Molecule:twitching motility protein pilt; PDBTitle: the crystal structure of the c-terminal domain of aquifex2 aeolicus pilt
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLN. TADINICSVEDPVEIPIAGLNQTQIHPR. .
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Template Sequence  PEFKKLGLPDK. . . . VLELCHRKXGLILVTGPTGSGKSTTIASXIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVG
Template Known Secondary structure 

GGGSS

T....GGG
SS
STT
S


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S



SSSBT
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   117..120....... ..130.........140.........150.........160.........170.........180.........190..
 
   269270.........280.........290.........300.........310.........320.........330....... ..340.
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Query Sequence  . AGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWM. . . . . . LSSA
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Template Sequence  EDTKSFADALRAALREDPDVIFVGEXRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFI
Template Known Secondary structure  TTBS


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   193......200.........210.........220.........230.........240.........250.........260.........270..
 
   342.......350.........360.........370.........380.........390.........400.........410........
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Query Sequence  LTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDV. . .
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Template Sequence  LQGIISQRLLPKIGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GRVLAYGLLIPNTAIRNLIRENKLQQVY
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SSS.....................................SS


T
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   273......280....... ..290.........300.........310.....
 
   419420.........430.........440.........450.........
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Query Sequence  ESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPH
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Template Sequence  SLXQSGQAETGXQTXNQTLYKLYKQGLITLEDAXEASPDPK
Template Known Secondary structure  S
S
TT
TTSS

S
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   316...320.........330.........340.........350......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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