Job Description P36645 Confidence 96.97% Date Thu Jan 5 11:53:22 GMT 2012 Rank 105 Aligned Residues 105 % Identity 20% Template c1z47B_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius Resolution 1.90 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	A	D	I	N	I	C	S	V	E	D	P	V	E	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	G	E	M	V	G	L	L	G	P	S	G	S	G	K	T	T	I	L	R	L	I	A	G	L	E	R	P	T	K	G	D	V	W	I	G	G	K	R	V	T	D	L	P	P	Q	K	R	N	V	G	L	V	F	Q	N	Y	A	L	F	Q	H	M	T	V	Y	D	N	V	S	F	G	L	R	E	K	R	V	P
Template Known Secondary structure			T	T								S	T	T	S	S										T	S	S			S							T	T				T	T			G	G	G	S	S						T	T					T	T	S								T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
																																270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.			.	.	.	.	310	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.										.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.										.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	F	Q	G	V	L	R	A	L	L	R	Q	D	P	D	V	I	M	I	G	E	I	R	D	G	.	.	.	.	.	.	E	T	A	E	I	A	I	K	A	.	.	A	Q	T	G	H	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		K	D	E	M	D	A	R	V	R	E	L	L	R	F	M	R	L	E	S	Y	A	N	R	F	P	H	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	A	P	R	P	Q	V	L	L	F	D	E	P	F	A	A	I	D	T	Q	I	R	R	E	L	R	T	F	V	R	Q	V	H	D	E	M	G	V	T
Template Known Secondary structure																T	T		G	G	G	T	T	S		G	G	G	S															T	T			S						S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		312	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	T	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	F	V	T	H
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions