Job Description P36645 Confidence 97.03% Date Thu Jan 5 11:53:22 GMT 2012 Rank 93 Aligned Residues 153 % Identity 15% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	T	L	P	C	R	G	G	E	K	V	V	L	R	L	L	Q	Q	V	G	Q	A	L	D	V	N	T	L	G	M	Q	P	L	Q	L	A	D	F	A	H	A	L	Q	Q	P	Q	G	L	V	L	V	T	G	P	T	G	S	G	K	T	V	T	L	Y	S	A	L	Q	K	L	N	T	A	D	I	N	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	P	F	T	I	T	D	H	G	I	N	I	F	P	L	G	A	M	R	L	T	Q	R	S	S	N	V	R	V	S	S	G	V	V	R	L	D	E	M	C	G	G	G	F	F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I
Template Known Secondary structure									T	T							T	T	T			S												S								T	T	S	S			S	S									T	T	S	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		248	.			250	.	.	.	.																.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300
Predicted Secondary structure				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.												.	.	.	.	.	.
Query SS confidence				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.												.	.	.	.	.	.
Query Sequence		S	V	.	.	E	D	P	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	I	A	G	L	N	Q	T	Q	I	H	P	R	A	G	L	T	F	Q	G	V	L	R	A	L	L	R	.	.	.	.	Q	D	P	D	V	I	M	I	G	E	I	.	.	.	.	.	.	R	D	G	E	T	A	E
Query Conservation				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.												.	.	.	.	.	.
Alig confidence				.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	A	Y	E	E	S	R	A	Q	L	L	R	N	A	Y	S	W	G	M	D	F	E	E	M	E	R	Q	N	L	L	K	I	V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	V	S	N	N	A	F	R
Template Known Secondary structure					S	S	S											T	T	S									T	T	S								G	G	G	S															T	T			S											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		301	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		I	A	I	K	A	.	.	.	.	.	A	Q	T	G	H	L	V	L	S	T	L	H	T	N	S
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		Q	F	V	I	G	V	T	G	Y	A	K	Q	E	E	I	T	G	L	F	T	N	T	S	D	Q
Template Known Secondary structure														T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions