Return to main results Retrieve Phyre Job Id

Job DescriptionP36645
Confidence97.26%DateThu Jan 5 11:53:22 GMT 2012
Rank63Aligned Residues52
% Identity17%Templatec1sxjA_
PDB info PDB header:replicationChain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210. ........220.........230.........240
Predicted Secondary structure 








..................











Query SS confidence 






















. . . . . . . . . . . . . . . . . .




























Query Sequence  GQALDVNTLGMQPLQLADFAHAL. . . . . . . . . . . . . . . . . . QQPQGLVLVTGPTGSGKTVTLYSALQKLN
Query Conservation       
  

        
    ..................    




 










 
 
    
Alig confidence 






















..................




























Template Conservation 


    



    
  
  

  
                   
 







 



 
  





Template Sequence  YAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELG
Template Known Secondary structure  T

SSGGG

S
TTTT



TTSTTS
S
STTSSTT
Template Predicted Secondary structure 






























Template SS confidence 





































































   302.......310.........320.........330.........340.........350.........360.........370.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions