Job Description Q5H777 Confidence 5.61% Date Wed Jan 25 15:21:15 GMT 2012 Rank 45 Aligned Residues 63 % Identity 19% Template d1ihma_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Caliciviridae-like VP Resolution 3.40

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		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																							.	.				.
Query SS confidence																							.	.				.
Query Sequence		S	S	M	A	L	L	A	P	N	V	N	S	Y	R	R	F	Q	P	G	M	Y	.	.	V	P	T	.	Q	A	S	W	G	H	N	N	R	T	V	A	L	R	I	P	C	G	D	R	H	N	H	R	V	E	Y	R	V	A	G	A	D	A	N	P	Y	L	V	M	A	A	I	F	A	G	I	L	H	G
Query Conservation																							.	.				.
Alig confidence																							.	.				.									.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.												.
Template Sequence		S	T	A	V	A	T	A	G	Q	V	N	P	I	D	P	W	I	I	N	N	F	V	Q	A	P	Q	G	E	F	T	I	S	P	N	N	.	.	.	.	.	.	.	.	.	.	T	P	G	D	V	L	F	D	L	S	L	.	G	P	H	L	N	P	F	L	L	H	L	S	Q	M	Y	N	G	W	V	G
Template Known Secondary structure		T	S	G	G	G	T	S	S			B				T	T	T	T	T														T	T	S	.	.	.	.	.	.	.	.	.	.		T	T									.	S	G	G	G	S								T	T	B	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.											.	.	.	.	.	1080	.	.	.	.	.		.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions