Job Description Q5H777 Confidence 100.00% Date Wed Jan 25 15:21:15 GMT 2012 Rank 7 Aligned Residues 341 % Identity 20% Template c2qc8J_ PDB info PDB header:ligase Chain: J: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of human glutamine synthetase in complex with adp2 and methionine sulfoximine phosphate Resolution 2.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		Q	E	V	K	R	Y	L	E	R	Y	P	N	T	Q	Y	V	D	V	L	L	T	D	L	N	G	C	F	R	G	K	R	I	P	V	S	S	L	K	K	L	E	K	.	.	.	.	.	.	G	C	Y	F	P	A	S	V	F	A	M	D	I	L	G	N	V	V	E	E	A	G	L	G	Q	E	M	G	E	P	D	R
Query Conservation																																												.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	I	K	Q	V	Y	M	S	L	P	Q	G	E	K	V	Q	A	M	Y	I	W	I	D	G	T	G	E	G	L	R	C	K	T	R	T	L	D	S	E	P	K	C	V	E	E	L	P	E	W	N	F	D	G	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	S	E	G	S	N	S	D	M
Template Known Secondary structure										T	S				S											T	T	S	S										S	S			S	S	G	G	G	S							G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S		G	G	G
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.														.	.	70	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	V	P	V	L	G	S	L	T	P	S	A	A	D	P	E	F	I	G	Q	M	L	L	T	M	V	D	E	D	G	A	P	F	D	V	E	P	R	N	V	L	N	R	L	W	Q	Q	L	R	Q	R	G	L	F	P	V	V	A	V	E	L	E	F	Y	L	L	D	R	Q	R	D	A	E	G	Y	L	Q	P	P
Query Conservation
Alig confidence																		.	.																																				.	.																					.	.	.	.	.
Template Conservation																		.	.																																				.	.																					.	.	.	.	.
Template Sequence		Y	L	V	P	A	A	M	F	R	D	P	F	R	K	D	P	.	.	N	K	L	V	L	C	E	V	F	K	Y	N	R	R	P	A	E	T	N	L	R	H	T	C	K	R	I	M	D	M	V	S	N	Q	H	.	.	P	W	F	G	M	E	Q	E	Y	T	L	M	G	T	D	G	H	P	F	G	.	.	.	.	.
Template Known Secondary structure												T	T	T		T	T	.	.											T	T	S		B		T	T												T	T	G	G	G		.	.														T	T	S	S	B	T	T	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																				.	.																					.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		C	A	P	G	T	D	D	R	N	T	Q	S	Q	V	Y	S	V	D	N	L	N	H	F	.	.	A	D	V	L	N	D	I	D	E	L	A	Q	L	Q	L	I	P	A	D	G	A	V	A	E	A	S	P	G	Q	F	E	I	N	L	Y	H	T	D	N	V	L	E	A	C	D	D	A	L	A	L	K	R	L	V	R
Query Conservation																									.	.
Alig confidence		.																							.	.																																							.
Template Conservation		.																																																															.
Template Sequence		.	W	P	S	N	G	F	P	G	P	Q	G	P	Y	Y	C	G	V	G	A	D	R	A	Y	G	R	D	I	V	E	A	H	Y	R	A	C	L	Y	A	G	V	K	I	A	G	T	N	A	E	V	M	P	A	Q	W	E	F	Q	I	G	P	C	E	.	G	I	S	M	G	D	H	L	W	V	A	R	F	I	L	H
Template Known Secondary structure		.	S		T	T	S			S		S	S	S		T	T			S	T	T	T																		T										S	S	T	T											.	T	T
Template Predicted Secondary structure		.																																																															.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	M	A	E	K	H	K	M	H	A	T	F	M	A	K	P	Y	E	E	H	.	A	G	S	G	M	H	I	H	I	S	M	Q	N	N	R	G	E	N	V	L	S	D	A	E	G	E	D	S	P	L	L	K	K	M	L	A	G	M	I	D	L	M	P	S	S	M	A	L	L	A	P	N	V	N	S	Y	R	R	F
Query Conservation																						.
Alig confidence																						.																			.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		R	V	C	E	D	F	G	V	I	A	T	F	D	P	K	P	I	P	G	N	W	N	G	A	G	C	H	T	N	F	S	T	K	A	M	R	E	E	N	.	.	.	.	.	.	.	G	L	K	Y	I	E	E	A	I	E	K	L	S	K	R	H	Q	Y	H	I	R	A	Y	D	P	K	G	G	L	D	N	A	R	R
Template Known Secondary structure							T	T							S		S	S		S	S	S				B												S	T	T	.	.	.	.	.	.	.	T													T									S	S	T	T	T	T					T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.															.	.
Query SS confidence												.	.	.															.	.
Query Sequence		Q	P	G	M	Y	V	P	T	Q	A	.	.	.	S	W	G	H	N	N	R	T	V	A	L	R	I	P	.	.	C	G	D	R	H	N	H	R	V	E	Y	R	V	A	G	A	D	A	N	P	Y	L	V	M	A	A	I	F	A	G	I	L	H	G	L	D	N	E
Query Conservation												.	.	.															.	.
Alig confidence												.	.	.															.	.																																	.
Template Conservation																																																															.
Template Sequence		L	T	G	F	H	E	T	S	N	I	N	D	F	S	A	G	V	A	N	R	S	A	S	I	R	I	P	R	T	V	G	Q	E	K	K	G	Y	F	E	D	R	R	P	S	A	N	C	D	P	F	S	V	T	E	A	L	I	R	T	C	L	.	L	N	E	T	G
Template Known Secondary structure			B	S	S	S	S			B	T	T							T		T	T	S	S											T		S								B	T	T															T	.	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions