Job Description Q5H777 Confidence 100.00% Date Wed Jan 25 15:21:15 GMT 2012 Rank 4 Aligned Residues 411 % Identity 22% Template c2j9iL_ PDB info PDB header:ligase Chain: L: PDB Molecule:glutamate-ammonia ligase domain-containing PDBTitle: lengsin is a survivor of an ancient family of class i2 glutamine synthetases in eukaryotes that has undergone3 evolutionary re-engineering for a tissue-specific role4 in the vertebrate eye lens. Resolution 17.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		F	T	Q	E	V	K	R	Y	L	E	R	Y	P	N	T	Q	Y	V	D	V	L	L	T	D	L	N	G	C	F	R	G	K	R	I	P	V	S	S	L	K	K	.	.	L	E	K	G	C	Y	F	P	A	S	V	F	A	M	D	I	L	G	N	V	V	E	E	A	G	L	G	Q	E	M	G	E	P	D	R	T	C
Query Conservation																																											.	.
Alig confidence														.																													.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	E	H	V	L	T	M	L	N	E	H	.	A	A	A	F	V	R	F	E	A	T	D	A	A	G	A	S	R	S	K	S	I	P	A	Q	F	F	E	K	V	I	H	A	R	G	Y	L	E	D	G	E	V	N	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	G	A	A	A	S	D	I	V	L
Template Known Secondary structure													T	.	T		S									S	S	S									G	G	G			T	T										G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T
Template Predicted Secondary structure														.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.													.	.	.	.	.	60	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		V	P	V	L	G	S	L	T	P	S	A	A	D	P	E	F	I	G	Q	M	L	L	T	M	V	D	E	D	G	A	P	F	D	V	E	P	R	N	V	L	N	R	L	W	Q	Q	L	R	Q	R	G	L	F	P	V	V	.	.	A	V	E	L	E	F	Y	L	L	D	R	Q	R	D	A	E	G	Y	L	Q	P	P
Query Conservation																																																										.	.
Alig confidence																									.	.	.	.																														.	.																.	.	.	.	.	.	.
Template Conservation																									.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		M	P	E	L	S	T	A	A	V	A	A	A	A	A	A	A	T	A	A	V	I	C	D	.	.	.	.	G	G	A	A	A	A	A	S	P	R	Y	I	A	R	A	A	L	A	Q	L	Q	A	A	G	A	A	A	G	L	L	S	A	F	I	A	D	F	C	I	F	G	V	P	E	V	I	.	.	.	.	.	.	.
Template Known Secondary structure					S	S						T	T	S	S	S	S								.	.	.	.			S	S		S																	T	T	S		S														S						.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	P	G	T	D	D	R	N	T	Q	S	Q	V	Y	S	V	D	N	L	N	H	F	A	D	V	L	N	D	I	D	E	L	A	Q	L	Q	L	I	P	A	D	G	A	V	A	E	A	S	P	G	Q	F	E	I	N	L	Y	H	T	D	N	V	L	E	A	C	D	D	A	L	A	L	K	R	L	V	R	L	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	S	K	T	I	S	F	P	A	S	T	T	A	A	A	A	D	Q	P	Q	E	A	A	A	G	G	A	A	G	A	A	A	G	A	A	G	G	A	A	A	A	G	A	A	E	I	C	F	L	P	E	A	A	G	A	A	A	A	D	N	A	F	T	L	R	T	G	L	Q	E	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			S	S									T	T		T	T	G	G	G	S			T	T				S				B	T	T	B						S	S			T	T	T	T	T	T	T			S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	E	K	H	K	M	H	A	T	F	M	A	K	P	Y	E	E	H	A	G	S	G	M	H	I	H	I	S	M	Q	N	N	R	G	E	N	V	L	S	D	A	E	G	E	.	D	S	P	L	L	K	K	M	L	A	G	M	I	D	L	M	P	S	S	M	A	L	L	A	P	N	V	N	S	Y	R	R	F	Q	P
Query Conservation																																														.
Alig confidence																																		.												.
Template Conservation																																		.
Template Sequence		A	R	R	Y	N	A	I	A	S	A	A	A	A	A	A	A	A	A	A	G	A	G	S	H	S	I	W	D	V	G	A	A	.	G	T	N	A	F	A	G	A	S	G	A	R	A	T	L	T	G	A	K	W	L	A	G	L	L	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
Template Known Secondary structure				T	T	T							T	T	S	S	T	T	S				B										T	.	T			S	S		S	S	S	G	G	G																								T		S							T	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		G	M	Y	V	P	T	Q	A	S	W	G	H	N	N	R	T	V	A	L	R	I	P	C	.	G	D	R	H	N	H	R	V	E	Y	R	V	A	G	A	D	A	N	P	Y	L	V	M	A	A	I	F	A	G	I	L	H	G	L	D	N	E	L	P	L	Q	E	E	V	E	G	N	G	L	E	Q	E	G	L	P	F
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		G	A	A	A	A	A	A	T	A	W	G	A	A	A	A	A	C	A	L	N	I	A	A	A	A	A	A	K	G	A	Q	I	E	N	K	A	G	A	A	A	A	N	P	Y	L	V	L	A	A	T	V	A	A	G	L	D	G	I	Q	S	A	G	A	A	A	G	A	A	A	A	D	A	A	A	A	A	P	S	E	I
Template Known Secondary structure		S	T	T									S	S		T	T									S	S	G	G	G							S		B	T	T	S																				T					S		B		S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		P	I	R	Q	S	D	A	L	G	E	F	I	E	N	.	D	H	L	R	R	Y	L	G	E	R	F	C	H	V	Y	H	A	C	K	N	D	E	L	L	Q	F	E	R	L	I	T	E	T	E	I	E	W	M	L	K
Query Conservation																.
Alig confidence																.																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		P	G	K	M	E	D	A	L	A	A	L	E	Q	D	A	E	C	L	K	A	G	L	G	E	A	F	I	R	A	A	V	A	A	A	K	Y	E	L	E	N	E	.	.	.	E	T	D	A	E	G	N	K	F	L	E
Template Known Secondary structure			S	S									T	T			S	S	S	S		S																					.	.	.
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.				.	.	410	.	.	.	.	.	.	.	.