Job Description Q5H777 Confidence 4.34% Date Wed Jan 25 15:21:15 GMT 2012 Rank 74 Aligned Residues 135 % Identity 12% Template c2iruA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative dna ligase-like protein rv0938/mt0965; PDBTitle: crystal structure of the polymerase domain from mycobacterium2 tuberculosis ligase d Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.													.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	D	I	D	E	L	A	Q	L	Q	L	I	P	A	D	G	A	V	A	E	A	S	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Q	F	E	I	N	L	Y	H	T	D	N	V	L	E	A	C	D	D	A	L	A	L	K	R	L	V	R	L	M	A	E	K	H	K	M	H	A	T	F	M	A	K	P
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.															.	.																												.	.
Template Conservation																																																			.	.																												.	.
Template Sequence		A	T	G	L	A	W	I	A	Q	Q	A	A	L	E	V	H	V	P	Q	W	R	F	V	A	E	P	G	S	G	E	L	N	P	G	P	A	T	R	L	V	F	D	L	D	P	G	E	G	V	.	.	M	M	A	Q	L	A	E	V	A	R	A	V	R	D	L	L	A	D	I	G	L	V	T	F	P	V	T	.	.
Template Known Secondary structure											T	T								S							T	T	T																			T	T		.	.																		T	T	T								.	.
Template Predicted Secondary structure																																																			.	.																												.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	H	A	G	S	G	M	H	I	H	I	S	M	Q	N	N	R	G	E	N	V	L	S	D	A	E	G	E	D	S	P	L	L	K	K	M	L	A	G	M	I	D	L	M	P	S	S	M	A	L	L	A	P	N	V	N	S	Y	R	R	F	Q	P	G	M	Y	V	P	T	Q	A	S	W	G	H	N	N	R
Query Conservation
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.																		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	S	G	S	K	G	L	H	L	Y	T	P	L	D	E	P	V	S	.	.	.	.	.	.	.	.	.	.	.	S	R	G	A	T	V	L	A	K	R	V	A	Q	R	L	E	Q	.	.	.	.	A	M	P	A	L	V	T	S	T	M	T	K	S	L	R	A	G	K	V	F	V	D	W	S	Q	N	S	G
Template Known Secondary structure		.	.	.		S	S	S														.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.			T	T	T			S	S			G	G	G		T	T	S						G	G	G	S	T
Template Predicted Secondary structure		.	.	.																		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
					175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.												.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	L	R	I	P	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	T	T	I	A	P	Y	S
Template Known Secondary structure		T						T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions