Job Description Q5H777 Confidence 100.00% Date Wed Jan 25 15:21:15 GMT 2012 Rank 1 Aligned Residues 433 % Identity 24% Template c1fpyE_ PDB info PDB header:ligase Chain: E: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin Resolution 2.89 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		F	T	Q	E	V	K	R	Y	L	E	R	Y	P	N	T	Q	Y	V	D	V	L	L	T	D	L	N	G	C	F	R	G	K	R	I	P	V	S	S	L	K	K	.	.	L	E	K	G	C	Y	F	P	A	S	V	F	A	M	D	I	L	G	N	V	V	E	E	A	G	L	G	Q	E	M	G	E	P	D	R	T	C
Query Conservation																																											.	.
Alig confidence														.																													.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	E	H	V	L	T	M	L	N	E	H	.	E	V	K	F	V	D	L	R	F	T	D	T	K	G	K	E	Q	H	V	T	I	P	A	H	Q	V	N	A	E	F	F	E	E	G	K	M	F	D	G	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.	G	G	W	K	G	I	N	E	S	D	M	V	L
Template Known Secondary structure													T	.	T											S	S	S									G	G	G															T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T	T
Template Predicted Secondary structure														.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.													.	.	.	.	.	60	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																															.																								.	.
Query SS confidence																															.																								.	.
Query Sequence		V	P	V	L	G	S	L	T	P	S	A	A	D	P	E	F	I	G	Q	M	L	L	T	M	V	D	E	D	G	.	A	P	F	D	V	E	P	R	N	V	L	N	R	L	W	Q	Q	L	R	Q	R	G	L	.	.	F	P	V	V	A	V	E	L	E	F	Y	L	L	D	R	Q	R	D	A	E	G	Y	L	Q	P
Query Conservation																															.																								.	.
Alig confidence																															.																								.	.
Template Conservation
Template Sequence		M	P	D	A	S	T	A	V	I	D	P	F	F	A	D	S	T	L	I	I	R	C	D	I	L	E	P	G	T	L	Q	G	Y	D	R	D	P	R	S	I	A	K	R	A	E	D	Y	L	R	A	T	G	I	A	D	T	V	L	F	G	P	E	P	E	F	F	L	F	D	D	I	R	F	G	A	S	I	S	G	S
Template Known Secondary structure					G	G	G					S	S		S	S												T	T	T		S			T	T																T	T	S		S														S								T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.																		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query Sequence		P	C	A	P	G	T	D	D	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	S	Q	V	Y	S	V	D	N	L	N	H	F	A	D	V	L	N	D	I	D	E	L	A	Q	L	Q	L	I	P	A	D	G	A	V	A	E	A	S	.	P	G	Q	F	E	I	N	L	Y	H	T	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		H	V	A	I	D	D	I	E	G	A	W	N	S	S	T	K	Y	E	G	G	N	K	G	H	R	P	G	V	K	G	G	Y	F	P	V	P	P	V	D	S	A	Q	D	I	R	S	E	M	C	L	V	M	E	Q	M	G	L	V	V	E	A	H	H	H	E	V	A	T	A	G	Q	N	E	V	A	T	R	F	N	T
Template Known Secondary structure								T	T		G	G	G	G	S				T	T									T	T	T		S	S			T	T	S	S	T	T														T	T										S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		N	V	L	E	A	C	D	D	A	L	A	L	K	R	L	V	R	L	M	A	E	K	H	K	M	H	A	T	F	M	A	K	P	Y	E	E	H	A	G	S	G	M	H	I	H	I	S	M	Q	N	N	R	G	E	N	V	L	S	D	A	E	.	G	E	D	S	P	L	L	K	K	M	L	A	G	M	I	D	L	M
Query Conservation																																																															.
Alig confidence		.																																																			.										.
Template Conservation		.																																																			.
Template Sequence		.	M	T	K	K	A	D	E	I	Q	I	Y	K	Y	V	V	H	N	V	A	H	R	F	G	K	T	A	T	F	M	P	K	P	M	F	G	D	N	G	S	G	M	H	C	H	M	S	L	A	K	N	.	G	T	N	L	F	S	G	D	K	Y	A	G	L	S	E	Q	A	L	Y	Y	I	G	G	V	I	K	H	A
Template Known Secondary structure		.																						T	T							S		S	S	S	S	S														T	.	T			T	T	B		S	S	G	G	G	B
Template Predicted Secondary structure		.																																																			.
Template SS confidence
			228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		P	S	S	M	A	L	L	A	P	N	V	N	S	Y	R	R	F	Q	P	G	M	Y	V	P	T	Q	A	S	W	G	H	N	N	R	T	V	A	L	R	I	P	C	.	G	D	R	H	N	H	R	V	E	Y	R	V	A	G	A	D	A	N	P	Y	L	V	M	A	A	I	F	A	G	I	L	H	G	L	D	N	E
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		K	A	I	N	A	L	A	N	P	T	T	N	S	Y	K	R	L	V	P	G	Y	E	A	P	V	M	L	A	Y	S	A	R	N	R	S	A	S	I	R	I	P	V	V	A	S	P	K	A	R	R	I	E	V	R	F	P	D	P	A	A	N	P	Y	L	C	F	A	A	L	L	M	A	G	L	D	G	I	K	N	K
Template Known Secondary structure									S		S	T	T					S	S	T	T	T	T									S	S		T	T									S	S	S	T	T										T	T	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																											.	.	.
Query SS confidence															.	.	.	.	.	.																											.	.	.
Query Sequence		L	P	L	Q	E	E	V	E	G	N	G	L	E	.	.	.	.	.	.	Q	E	G	L	P	F	P	I	R	Q	S	D	A	L	G	E	F	I	E	N	D	H	L	R	R	Y	.	.	.	L	G	E	R	F	C	H	V	Y	H	A	C	K	N	D	E	L	L	Q	F	E	R	L	I	T	E	T	E	I	E	W	M
Query Conservation															.	.	.	.	.	.																											.	.	.
Alig confidence															.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		I	H	P	G	E	P	M	D	K	N	L	Y	D	L	P	P	E	E	A	K	E	I	P	Q	V	A	G	S	L	E	E	A	L	N	A	L	D	L	D	R	E	F	L	K	A	G	G	V	F	T	D	E	A	I	D	A	Y	I	A	L	R	R	E	E	D	D	R	V	R	M	T	P	H	P	V	E	F	E	L	Y
Template Known Secondary structure						S				S			S	S	S		T	T	S						B			S	S											T	T					G	G	G	S	S																						S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		469	470
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		466	.