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Job DescriptionP34210
Confidence94.44%DateThu Jan 5 11:53:03 GMT 2012
Rank21Aligned Residues208
% Identity11%Templated1uynx_
SCOP infoTransmembrane beta-barrels Autotransporter Autotransporter
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EKISTEINLGTLSGKTKERVYEPEEGGRKVSQLDWKYSNAAILKGAVNWELNPWLSVGAAGWTTLNSRGGNMVDQDWMDS
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Template Sequence  ENTTAAATLGMGRSTWSENSANAKT. . . . . . . . . . . . . DSISLFAGIRHDAGDIGYLKGLFSYGRY. . KNSISRSTGADE
Template Known Secondary structure  TTTT.............TTT..
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Query Sequence  GTPGTWTDESRHPDTRLNYANEFDLNVKGWFLKESDYRLAIMAGYQESRYSFNATGGTYIYSENGGFRNETGALPDKIKV
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Template Sequence  HAEGSVNG. . . . . . . . . . TLMQLGALGGVNV. . . PTGDLTVEGGLRYDLLK. . . . . . QDAFAEKG. . . . . . . . . . SALGW
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Query Sequence  IGYKQHFKIPYVGLTGNYRY. DNFEFGGAFKYSGWVRGSDNDEHYVRQTTFRSKVINQNYYSVAVNAGYYITPEAKVYIE
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Template Sequence  SGNSLTEGTLVGLAGLKLSQPLSDKAVLFATAGVERDLNGRDYTVTG. . . . . . . . . PHTRLVAGLGADVEFGNGWNGLAR
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   975....980.........990.........1000.........1010.........1020. ........1030.........1040.....
 
   269270.........280.........290.........300.........310.....
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Query Sequence  GVWSRLTNKKGDTSLYDRSDNTSEHNNNGAGIENYNFITTAGLKYTF
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Template Sequence  YSYAGS. . . . . . . . . . . . . . . . . . . . . . . . . KQYGNHSGRVGVGYRF
Template Known Secondary structure  .........................TT
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   1063..... .1070.........1080....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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