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Job DescriptionP34210
Confidence96.66%DateThu Jan 5 11:53:03 GMT 2012
Rank16Aligned Residues120
% Identity28%Templated1qjpa_
SCOP infoTransmembrane beta-barrels OMPA-like Outer membrane protein
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  KYSNAAILKGAVNWELNPWLSVGAAGWTTLNSRGGNMVDQDWMDSGTPGTWTDESRHPDTRLNYANEFDLNVKGWFLKES
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Template Sequence  QHENKLGAGAFGGYQVNPYVGFEMGY. DWLGRMPYAYK. . . . . . . . . . . . . . . . . . . . . . . . . . AQGVQLTAKLGYPITD
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   17..20.........30.........40.. .......50... ......60.........
 
   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  DYRLAIMAGYQESRYSFNATGGTYIYSENGGFRNETGALPDKIKVIGYKQHFKIPYVGLTGNYRYDNFEFGGAFKYSGWV
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Template Sequence  DLDIYTRLGGMVWRADTYSNVY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
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   90.........100.........110.
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  RGSDNDEHYVRQTTFRSKVINQNYYSVAVNAGYYITPEAKVYIEGVWSRLTNKKGDTSLYDRSDNTSEHNNNGAGIENYN
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Template Sequence  . . . . . . . . . . . . . . . GKNHDTGVSPVFAGGVEYAITPEIATRLEYQWT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . N
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   112.......120.........130.........140.... .
 
   305....310.....
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Query Sequence  FITTAGLKYTF
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Template Sequence  GMLSLGVSYRF
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   160.........170
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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