Job Description P34210 Confidence 73.61% Date Thu Jan 5 11:53:03 GMT 2012 Rank 28 Aligned Residues 153 % Identity 14% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	D	Y	R	L	A	I	M	A	G	Y	Q	E	S	R	Y	S	F	N	A	T	G	G	T	Y	I	Y	S	E	N	G	G	F	R	N	E	T	G	A	L	P	D	K	I	K	V	I	G	Y	K	Q	H	F	K	I	P	Y	V	G	L	T	G	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L	K	Y	D	A	N	N	I	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N
Template Known Secondary structure			B		S											T	T	T	T														G	G	G	T	T	S	S	S	S		S	S														T	T												S		S			S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	D	N	F	E	F	G	G	A	F	K	Y	S	G	W	V	R	G	S	D	N	D	E	H	Y	V	R	Q	T	T	F	R	S	K	V	I	N	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	I	T	P	E	A	K	V	Y	I	E	G	V	W	S	R	L	T	N	K	K	G	D	T	S	L	Y	D	R	S
Query Conservation
Alig confidence																																					.																																												.
Template Conservation																																					.																																												.
Template Sequence		K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D	I	E	G	I	G	.	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	.
Template Known Secondary structure															S	S	S														S	B	T	T	T	B	.																S	S	S	S														S	S		T	T							.
Template Predicted Secondary structure																																					.																																												.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	T	S	E	H	N	N	N	G	A	G	I	E	N	Y	N	F	I	T	T	A	G	L	K	Y	T	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				331	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions