Job Description P34210 Confidence 95.02% Date Thu Jan 5 11:53:03 GMT 2012 Rank 20 Aligned Residues 166 % Identity 14% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	A	V	N	W	E	L	N	P	W	L	S	V	G	A	A	G	W	T	T	L	N	S	R	G	G	N	M	V	D	Q	D	W	M	D	S	G	T	P	G	T	W	T	D	E	S	R	H	P	D	T	R	L	N	Y	A	N	E	F	D	L	N	V	K	G	W	F	L	K	E	S	D	Y	R	L	A	I	M
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																																.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																																.
Template Sequence		I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	N	D	.	.	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	.
Template Known Secondary structure											S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		.	.								S														S	S	S	B							.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.																																.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																				.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	G	Y	Q	E	S	R	Y	S	F	N	A	T	G	G	T	Y	I	Y	S	E	N	G	G	F	R	N	E	T	G	A	L	P	D	K	I	K	V	I	G	Y	K	Q	H	F	K	I	P	Y	V	G	L	T	G	N	Y	R	Y	D	N	F	E	F	G	G	A	F	K	Y	S	G	W	V	R	G	S	.	D	N	D
Query Conservation																																																																														.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	Y	L	E	R	G	F	N	M	D	D	S	R	N	N	G	E	F	S	.	.	.	.	.	.	.	.	.	.	.	T	Q	E	I	R	A	Y	L	P	L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q
Template Known Secondary structure		.	.	.	.								S	S	T	T			T	T				.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																	T	T	T	T
Template Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.	.	.	.	200	.														.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Y	V	R	Q	T	T	F	R	S	K	V	I	N	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	I	T	P	E	A	K	V	Y	I	E	G	V	W	S	R	L	T	N	K	K	G	D	T	S	L	Y	D	R	S	D	N	T	S	E	H	N	N	N	G	A	G	I	E	N	Y	N	F	I	T	T	A	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	I	E	R	E	G	H	D	F	N	R	.	.	.	.	.	.	.	.	V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	A	G	V	G
Template Known Secondary structure		T			S									.	.	.	.	.	.	.	.										S	S	S															S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																					270	.	.	.	.	.
		311	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Y	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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