 |
Job Description | P34210 | Confidence | 4.22% | Date | Thu Jan 5 11:53:03 GMT 2012 |
Rank | 49 | Aligned Residues | 36 |
% Identity | 14% | Template | c1p58C_ |
PDB info |
PDB header:virus | Chain: C: PDB Molecule:major envelope protein e; |
PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
|
Resolution | 9.50 Å |
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | G | G | N | M | V | D | Q | D | W | M | D | S | G | T | P | G | T | W | T | D | E | S | R | . |
. |
. |
. |
H | P | D | T | R | L | N | Y | A | N | E | F | D |
Query Conservation |   |
  |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   | . | . | . | . |
|   |   |
|   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |
|   |
|
|   |
|
| . |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|   |
|
|
|
|   |
Template Sequence |   |
K | D | K | A | W | L | V | H | R | Q | W | F | L | D | L | . |
P | L | P | W | L | P | G | A | D | T | Q | G | S | N | W | . |
I | Q | K | E | T | L | V | T | F | K |
Template Known Secondary structure |   |
S | S |
|  |  |  |
|
|  |  |  |  |  | S |
| . |
| S |
|  |  |
|
| G | G | G |
|
|
| S |
| . | S | S | G | G | G | T | B |
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . | . | . | 240 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|