Job Description P0A8M0 Confidence 94.92% Date Thu Jan 5 11:08:10 GMT 2012 Rank 110 Aligned Residues 102 % Identity 16% Template d1jmca1 SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.40

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		S	V	V	P	V	A	D	V	L	Q	G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	R	D	S	K	.	.	.	.	.	.	.	.	A	G	I	S	F	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																	.	.	.	.	.	.	.	.														.	.																.	.
Template Conservation														.	.	.	.																																						.	.																.	.
Template Sequence		K	V	V	P	I	A	S	L	T	P	Y	Q	.	.	.	.	S	K	W	T	I	C	A	R	V	T	N	K	S	Q	I	R	T	W	S	N	S	R	G	E	G	K	L	F	S	L	E	L	V	D	E	S	G	.	.	E	I	R	A	T	A	F	N	E	Q	V	D	K	F	F	.	.	P	L	I	E	V	N	K	V
Template Known Secondary structure			B			G	G	G			T	T		.	.	.	.																					S	S													S	S		.	.															G	.	.	G	G			T	T
Template Predicted Secondary structure														.	.	.	.																																						.	.																.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.
		74	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		V	I	V	T	G	K	V	V	A	S	.	.	.	.	.	P	G	Q	G	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V	E	D	P	D	T	Y	P	M
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	F	S	K	G	T	L	K	I	A	N	K	Q	F	T	A	V	K	N	D	Y	E	M	T	F	N	N	E	T	S	V	M	P	C	E	D	D	H	H	L	P	T
Template Known Secondary structure														G	G	G						S							T	T								S		S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions