Job Description P0A8M0 Confidence 99.86% Date Thu Jan 5 11:08:10 GMT 2012 Rank 33 Aligned Residues 208 % Identity 25% Template d1jjca_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.60

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.											.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	.	.	.	.	.	.	.	.	.	.	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		I	T	L	M	E	R	E	L	V	E	I	F	R	A	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P	L	G	E	E	V	.	.	.	.	.	E	G	R	L	L	L	R	T
Template Known Secondary structure															T	T	T								S								T	G	G	G	T			T	T	S	G	G	G	G	G	S				B				S	S						T	T	S				.	.	.	.	.		S						S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.
		211	.	.	.	.		.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure							.										.	.																																	.	.
Query SS confidence							.										.	.																																	.	.
Query Sequence		S	G	Q	L	N	.	G	E	T	Y	A	C	A	L	S	.	.	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	F	.	.	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K	A	V	L	E	E	R	A	D	D	M
Query Conservation							.										.	.																																	.	.
Alig confidence							.										.	.																		.															.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	S	P	M	Q	V	R	Y	M	V	A	H	T	P	P	F	R	I	V	V	P	G	R	V	F	R	F	E	Q	T	D	A	T	.	H	E	A	V	F	H	Q	L	E	G	L	V	V	G	E	G	I	A	M	A	H	L	K	G	A	I	Y	E	L	A	Q	A	L	F	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	T										S		S	S													S				S	S	.			S												T	T																			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	F	A	E	R	V	D	K	D	A	V	S	R	L	E	R	F	I	E	A	D	F	A	Q	V	D	Y	T	D	A	V	T	I	L	E	N	C	G	R	K	F	E	N	P	V	Y	W	G	V	D	L	S	S	E	H	E	R	Y	L	A	E	E	H	F	K	A	P	V	V	V	K	N	Y	P	K	D	I	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	D	S	K	V	R	F	Q	P	V	Y	F	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																				246	.	.	.	250	.	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.							.	.	.	.
Predicted Secondary structure																									.	.	.																																													.	.	.	.	.	.
Query SS confidence																									.	.	.																																													.	.	.	.	.	.
Query Sequence		F	Y	M	R	L	N	E	D	G	K	T	V	A	A	M	D	V	L	A	P	G	I	G	.	.	.	E	I	I	G	G	S	Q	R	E	E	R	L	D	V	L	D	E	R	M	L	E	M	G	L	N	K	E	D	Y	W	W	Y	R	D	L	R	R	Y	G	T	V	P	H	S	.	.	.	.	.	.	G	F	G	L
Query Conservation																									.	.	.																																													.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.												.	.	.							.	.											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	E	P	G	.	.	.	.	.	.	.	A	Q	F	A	V	W	W	P	E	G	G	K	W	L	E	L	G	G	A	G	.	.	M	V	H	P	K	V	F	Q	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	Y	R	E	R	L	G	L	P	P	A	Y	R	G	V	T	G	F	A	F	G	L
Template Known Secondary structure		T					.	.	.	.	.	.	.								G	G	G	T										.	.											.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T						T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.																					.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.														.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	E	R	L	I	A	Y	V	T	G	V	Q	N	V	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	E	R	L	A	M	L	R	Y	G	I	P	D	I	R	Y
Template Known Secondary structure												T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions