Job Description P0A8M0 Confidence 99.88% Date Thu Jan 5 11:08:10 GMT 2012 Rank 31 Aligned Residues 266 % Identity 19% Template c3racA_ PDB info PDB header:ligase Chain: A: PDB Molecule:histidine-trna ligase; PDBTitle: crystal strucutre of histidine--trna ligase subunit from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446. Resolution 2.30 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																															.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.
Query Sequence		A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	.	.	.	.	.	.	.	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V
Query Conservation																															.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	R	R	R	A	V	E	T	R	L	L	S	F	V	E	D	A	G	Y	E	P	V	T	S	G	L	F	E	Y	V	D	T	L	L	R	A	R	S	P	E	S	S	R	D	W	I	R	L	F	D	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	V	A	L	R	P
Template Known Secondary structure																			T	T								S									T	T	S		T	T	S						B					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																				.	.	.	90	.	.	.	.
		211	.	.	.	.		.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure							.						.	.	.	.	.	.
Query SS confidence							.						.	.	.	.	.	.
Query Sequence		S	G	Q	L	N	.	G	E	T	Y	A	.	.	.	.	.	.	C	A	L	S	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K	A	V	L	E	E	R	A	D
Query Conservation							.						.	.	.	.	.	.
Alig confidence							.						.	.	.	.	.	.																	.	.	.	.	.	.	.																.	.
Template Conservation																																			.	.	.	.	.	.	.																.	.
Template Sequence		E	M	T	P	S	I	A	R	M	A	A	P	R	V	A	A	G	R	T	P	I	R	W	C	Y	C	E	R	V	Y	R	R	T	.	.	.	.	.	.	.	A	A	E	S	T	Q	V	G	I	E	R	I	G	E	E	.	.	A	S	V	D	V	D	M	D	V	L	R	L	L	H	E	A	S	A	A	A	G	V	R
Template Known Secondary structure		S	S														T	T																	.	.	.	.	.	.	.													S	S		.	.																					T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	K	F	F	A	E	R	V	D	K	D	A	V	S	R	L	E	R	F	I	E	A	D	F	A	Q	V	D	Y	T	D	A	V	T	I	L	E	N	C	G	R	K	F	E	N	P	V	Y	W	G	V	D	L	S	S	E	H	E	R	Y	L	A	E	E	H	F	K	A	P	V	V	V	K	N	Y	P	K	D	I
Query Conservation
Alig confidence											.	.												.	.																			.	.	.	.	.	.	.	.	.
Template Conservation											.	.												.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		H	H	R	I	V	V	S	H	A	.	.	R	L	V	P	R	L	L	D	A	L	G	.	.	I	S	A	S	L	S	R	A	F	L	A	C	L	T	S	G	N	Y	.	.	.	.	.	.	.	.	.	V	Q	F	R	E	L	W	Q	L	H	A	A	K	D	V	D	L	L	A	N	L	L	T	W	S	P	A	E	R
Template Known Secondary structure		S								T	.	.	T									T	T	.	.																T			.	.	.	.	.	.	.	.	.												S			S									B				S	S
Template Predicted Secondary structure											.	.												.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	F	Y	M	R	L	N	E	D	G	K	T	V	A	A	M	D	V	L	A	P	G	I	G	E	I	I	G	G	S	Q	R	E	E	R	L	D	V	L	D	E	R	M	L	E	M	G	L	N	K	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	K	R	S	R	E	A	S	D	R	E	L	E	A	L	L	R	D	A	V	D	P	R	A	A	A	D	V	R	D	A	W	R	Y	L	C	R	L	A	E	A	L	H	D	S	G	L	A	S	D	V	V	T	F	D	L	A	L	H	R	E	L	D	Y	Y	T	G	L	V	F	E	M	F	A	P	G	V	G
Template Known Secondary structure			T	T	S	B														T	T		S																										T			T	T	T					T	T				S		T	T			S								T	T		S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
										417	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	Y	W	W	Y	R	D	L	R	R	Y	G	T	V	.	P	H	S	G	F	G	L	G	F	E	R	L	I	A	Y	V	T
Query Conservation		.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.									.	.				.
Template Conservation																		.	.
Template Sequence		A	P	I	A	Q	G	G	R	Y	D	E	L	L	A	Q	F	.	.	G	A	G	A	P	A	V	G	F	A	F	E	V	E	R	V	M	A	V	L	E
Template Known Secondary structure		S		S							T	T	T	T	G	G	G	.	.	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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