Job Description P0A8M0 Confidence 100.00% Date Thu Jan 5 11:08:10 GMT 2012 Rank 6 Aligned Residues 418 % Identity 28% Template c3m4qA_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative; PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs) Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	P	V	A	D	V	L	Q	G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	R	D	S	K	A	G	I	S	F	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		T	P	I	V	C	N	I	R	D	A	A	G	L	E	G	K	L	V	T	F	K	G	W	A	Y	H	I	R	K	A	R	K	T	L	I	F	V	E	L	R	D	G	S	G	Y	.	.	C	Q	C	V	I	F	G	K	E	L	C	E	P	E	K	V	K	L	L	T	R	E	C	S	L	E	I	T	G	R	L	N	A
Template Known Secondary structure										T	T	T			S	S	S																T	T									S	S			.	.							S	S	S	S											T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		83	.	.	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.
Query Sequence		S	P	G	Q	G	.	.	.	.	.	.	.	.	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V	E	D	P	D	T	Y	P	M	A	A	K	R	H	S	I	E	Y	L	R	E	V	A	H	L	R	P	R	T	N	L	I	G	A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E
Query Conservation							.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																						.
Template Conservation																																				.
Template Sequence		Y	A	G	K	N	H	P	P	E	I	A	D	I	L	N	L	E	M	Q	V	T	E	W	K	V	I	G	E	S	P	I	D	L	E	.	N	I	I	N	K	D	S	S	I	P	Q	K	M	Q	N	R	H	I	V	I	R	S	E	H	T	Q	Q	V	L	Q	L	R	S	E	I	Q	W	Y	F	R	K	Y	Y	H	D
Template Known Secondary structure				T	T					S		T	T	B		S																T	T			.			S	S	S										T					T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	F	F	W	V	S	T	P	L	I	T	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V	S	G	Q	L	N	G	E	T	Y	A	C	A	L	S	K	I	Y	T	F	G	P	T	F	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	H	F	T	E	I	Q	P	P	T	I	V	K	T	T	L	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	Y	F	N	E	P	A	Y	L	T	Q	S	S	Q	L	Y	L	E	S	V	I	A	S	L	G	K	S	F	C	M	L	S	S	Y	R
Template Known Secondary structure		T	T								S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T							S															S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																											.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K	A	V	L	E	E	R	A	D	D	M	K	F	F	A	E	R	V	D	K	D	A	V	S	R	L	E	R	F	I	E	A	D	F	A	Q	V	D	Y	T
Query Conservation
Alig confidence				.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	E	.	.	.	.	.	.	H	L	A	E	Y	L	H	L	E	A	E	L	P	F	I	S	F	E	D	L	L	N	H	L	E	D	L	V	C	T	V	I	D	N	V	M	A	V	H	G	D	K	I	R	K	M	N	P	H	L	K	L	.	.	.	.	.	.	.	.	.	P	T	R	P	F	K	R	M	T	Y	A
Template Known Secondary structure				.	.	.	.	.	.			S											S																																		T	T				.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure				.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.										.	.	.	.	.	.	.	.	290	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																			.																																						.
Query SS confidence																			.																																						.
Query Sequence		D	A	V	T	I	L	E	N	C	G	R	K	F	E	N	P	V	.	Y	W	G	V	D	L	S	S	E	H	E	R	Y	L	A	E	E	H	F	K	A	P	V	V	V	K	N	Y	P	K	D	I	K	A	F	Y	M	.	R	L	N	E	D	G	K	T	V	A	A	M	D	V	L	A	P	G	I	G	E	I	I	G
Query Conservation																			.																																						.
Alig confidence																			.															.																							.
Template Conservation																																		.
Template Sequence		D	A	I	K	Y	C	N	D	H	G	I	L	N	K	D	K	P	F	E	Y	G	E	D	I	S	E	K	P	E	R	Q	M	.	T	D	E	I	G	C	P	I	F	M	I	H	F	P	S	K	M	K	A	F	Y	M	S	K	V	P	G	H	P	D	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V	G
Template Known Secondary structure											T			S	S	S	S				T	T												.						S								B	G	G	G	S		S	S	B				T	T													T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Q	R	E	E	R	L	D	V	L	D	E	R	M	L	E	M	G	L	N	K	E	D	Y	W	W	Y	R	D	L	R	R	Y	G	T	V	P	H	S	G	F	G	L	G	F	E	R	L	I	A	Y	V	T	G	V	Q	N	V	R	D	V	I	P	F	P	R	T	P	R	N	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	M	R	I	W	N	Y	D	E	L	M	G	A	Y	K	A	N	G	L	N	P	D	P	Y	Y	W	Y	T	Q	Q	R	K	Y	G	S	C	P	H	G	G	Y	G	L	G	V	E	R	L	V	M	W	L	L	G	E	D	H	I	R	K	V	C	L	Y	P	R	Y	L	E	R	C	E
Template Known Secondary structure																			T	T				G	G	G									T	T																				T		S	S	G	G	G	G	S	S	S			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450