Job Description P0A8M0 Confidence 98.64% Date Thu Jan 5 11:08:10 GMT 2012 Rank 69 Aligned Residues 123 % Identity 22% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.
Query Sequence		A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	D	.	.	.	.	.	.	.	.	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F
Query Conservation																																				.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	V	Q	L	Q	V	A	L	V	S	Y	S	L	D	F	L	V	K	R	G	Y	T	P	F	Y	P	P	F	F	L	N	R	D	V	M	G	E	V	A	Q	L	S	Q	F	D	E	E	L	Y	Q	V	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	K	K	Y
Template Known Secondary structure																				T	T	T								S											S								T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																					.	.	.	.	260
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.														.
Query SS confidence																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.														.
Query Sequence		L	T	V	S	G	Q	L	N	G	E	T	Y	A	C	A	L	S	.	.	.	.	.	.	.	.	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	.	.	.	.	.	.	.	R	H	L	A	E	F	W	M	L	E	P	E	V	.	A	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K
Query Conservation																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.														.
Alig confidence																			.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.			.											.
Template Conservation																																																					.
Template Sequence		L	I	A	T	S	E	M	P	I	A	A	Y	H	R	G	R	W	F	T	E	L	K	E	P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	.	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	H	L	E	D	M	I	T
Template Known Secondary structure				S	S	T								T	T	T				S			S	S															T	T		S	S	S			S	T	T	S	S		.	S													S	S	T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	F	K	A	V	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	E	E	F	N	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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