Job Description P0A8M0 Confidence 46.28% Date Thu Jan 5 11:08:10 GMT 2012 Rank 134 Aligned Residues 76 % Identity 11% Template c3kojA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ycf41; PDBTitle: crystal structure of the ssb domain of q5n255_synp6 protein2 from synechococcus sp. northeast structural genomics3 consortium target snr59a. Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																.	.	.	.				.	.
Query SS confidence																.	.	.	.				.	.
Query Sequence		E	V	T	V	R	G	W	V	R	T	R	R	D	S	.	.	.	.	K	A	G	.	.	I	S	F	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A	S	P	G	Q	G	Q	Q	F	E	I
Query Conservation																.	.	.	.				.	.
Alig confidence																.	.	.	.				.	.																													.	.																								.	.
Template Conservation																																																					.	.																								.	.
Template Sequence		S	C	I	L	Q	A	T	V	V	E	A	P	Q	L	R	Y	A	Q	D	N	Q	T	P	V	A	E	X	V	V	Q	F	P	G	A	P	A	R	L	K	V	V	G	W	G	A	V	A	Q	E	L	Q	.	.	D	R	C	R	L	N	D	E	V	V	L	E	G	R	L	R	I	N	S	E	K	Q	T	.	.	E	L
Template Known Secondary structure																			T	T	S	S	S																						T								.	.					T	T																		.	.
Template Predicted Secondary structure																																																					.	.																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.
		93	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	S	K	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	T	R	V	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions