Job Description P0A8M0 Confidence 49.33% Date Thu Jan 5 11:08:10 GMT 2012 Rank 131 Aligned Residues 83 % Identity 14% Template c3k8aA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative primosomal replication protein; PDBTitle: neisseria gonorrhoeae prib Resolution 2.70 Å

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		19	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.															.	.	.	.	.	.	.	.
Query SS confidence											.	.	.															.	.	.	.	.	.	.	.
Query Sequence		E	V	T	V	R	G	W	V	R	.	.	.	T	R	R	D	S	K	A	G	I	S	F	L	A	V	.	.	.	.	.	.	.	.	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A	S	P	G	Q	G
Query Conservation											.	.	.															.	.	.	.	.	.	.	.
Alig confidence											.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	S	L	A	A	L	I	E	K	A	F	P	I	R	Y	T	P	A	G	I	P	V	L	D	I	I	L	K	H	E	S	W	Q	E	E	N	G	Q	Q	C	L	V	Q	L	E	I	P	A	R	I	L	G	R	Q	A	E	E	W	Q	Y	R	Q	G	D	C	A	T	V	E	G	F	L	A	Q	K	S	R	R	S
Template Known Secondary structure																			T	T	S																	T	T																					S	T	T		T	T												S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	P	M	L	R	I	Q	N	I	K	E	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions