Job Description P0A8M0 Confidence 98.27% Date Thu Jan 5 11:08:10 GMT 2012 Rank 83 Aligned Residues 125 % Identity 17% Template c3errB_ PDB info PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase Resolution 2.27 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V	S	G	Q	L
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	L	A	L	Y	E	L	A	L	L	R	F	A	M	D	F	M	A	R	R	G	F	L	P	M	T	L	P	S	Y	A	R	E	K	A	F	L	G	T	G	H	F	P	A	Y	R	D	Q	V	W	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	L	Y	L	T	G	T	A	E	V
Template Known Secondary structure																						T	T								S											T		T	T	T	T	G	G	G					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S					S	S	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.															.	.	.	220	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.
Query SS confidence												.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.
Query Sequence		N	G	E	T	Y	A	C	A	L	S	.	.	.	.	.	.	.	.	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	R	H	L	.	.	.	.	.	.	A	E	F	W	M	L	E	P	E	V	A	.	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V
Query Conservation												.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.
Alig confidence												.	.	.	.	.	.	.	.																					.	.	.	.	.	.												.
Template Conservation
Template Sequence		V	L	N	A	L	H	S	G	E	I	L	P	Y	E	A	L	P	L	R	Y	A	G	Y	A	P	A	F	R	S	E	A	G	S	F	G	K	D	V	R	G	L	M	R	V	H	Q	F	H	K	V	E	Q	Y	V	L	T	E	A	S	L	E	A	S	D	R	A	F	Q	E	L	L	E	N	A
Template Known Secondary structure							T	T	T					G	G	G		S															S			S	S	S		S	S	S	S	S		S													S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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