Job Description P0A8M0 Confidence 97.44% Date Thu Jan 5 11:08:10 GMT 2012 Rank 90 Aligned Residues 83 % Identity 20% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.										.	.
Query SS confidence																				.	.	.	.	.	.	.										.	.
Query Sequence		G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	.	.	.	.	.	.	.	R	D	S	K	A	G	I	S	F	.	.	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A
Query Conservation																				.	.	.	.	.	.	.										.	.
Alig confidence																				.	.	.	.	.	.	.										.	.									.	.														.	.	.	.	.
Template Conservation																																														.	.														.	.	.	.	.
Template Sequence		G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	.	.	S	I	R	V	T	L	W	D	N	L	T	D	I	.	.	.	.	.	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E
Template Known Secondary structure		G	G			S	S																					T	T	S													T	T		.	.								G	G	G	G	G	S	.	.	.	.	.				T	T
Template Predicted Secondary structure																																														.	.														.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	G	Q	G	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		G	.	.	Y	Y	G	G	L	E	C	T	A	N	Y	V	E	I	L	K	K	G
Template Known Secondary structure			.	.	T	T	S	S
Template Predicted Secondary structure			.	.
Template SS confidence
		82			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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