Job Description P0A8M0 Confidence 100.00% Date Thu Jan 5 11:08:10 GMT 2012 Rank 1 Aligned Residues 428 % Identity 30% Template c2xgtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V	A	D	V	L	Q	G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	R	D	S	K	A	G	I	S	F	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A	S
Query Conservation
Alig confidence								.	.	.																																				.	.												.
Template Conservation								.	.	.																																				.	.												.
Template Sequence		V	K	I	R	D	L	.	.	.	V	K	H	R	N	E	R	V	C	I	K	G	W	I	H	R	M	R	R	Q	G	K	S	L	M	F	F	I	L	R	D	G	T	G	F	.	.	L	Q	V	L	L	M	D	K	L	C	Q	.	T	Y	D	A	L	T	V	N	T	E	C	T	V	E	I	Y	G	A	I	K	E	V
Template Known Secondary structure				G	G	G	G	.	.	.	G	G		T	T	S															T	T	S									S	S			.	.							G	G	G	G	S	.	S								T	T
Template Predicted Secondary structure								.	.	.																																				.	.												.
Template SS confidence
		114	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		84		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	G	Q	G	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V	E	D	P	D	T	Y	P	M	A	A	K	R	H	S	I	E	Y	L	R	E	V	A	H	L	R	P	R	T	N	L	I	G	A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		P	E	E	A	P	N	G	H	E	L	I	A	D	F	W	K	I	I	G	N	A	P	P	G	G	I	D	N	V	L	N	E	E	A	S	V	D	K	M	L	D	N	R	H	L	V	I	R	G	E	N	A	A	A	L	L	R	L	R	A	A	A	T	R	A	M	R	E	H	F	Y	N	A	G	Y	V	E	V	A	P
Template Known Secondary structure						G	G	G																T	T	T	T	T	T	T	S		T	T									T					T	T	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	T	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V	S	G	Q	L	N	G	E	T	Y	A	C	A	L	S	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	L	V	Q	T	Q	V	E	G	G	S	T	L	F	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	F	G	E	Q	S	F	L	T	Q	S	S	Q	L	Y	L	E	T	C	I	P	T	L	G	D	V	F	C	I	A	Q	S	Y	R	A	E	K	S	R	T	R	R
Template Known Secondary structure			S			S			S	S		G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							S		S												S	S													S		B	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	A	E	F	W	M	L	E	P	E	V	A	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K	A	V	L	E	E	R	A	D	D	M	K	F	F	A	E	R	V	D	K	D	A	V	S	R	L	E	R	F	I	E	A	D	F	A	Q	V	D	Y	T	D	A	V	T	I	L	E	N
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		H	L	A	E	Y	A	H	V	E	A	E	C	P	F	I	T	L	D	D	L	M	E	K	I	E	E	L	V	C	D	T	V	D	R	L	L	A	D	E	E	A	K	K	L	L	E	H	I	N	P	K	F	Q	P	.	.	.	.	.	.	.	P	E	R	P	F	L	R	M	E	Y	K	D	A	I	K	W	L	Q	E
Template Known Secondary structure		B		S											S																							T	S												T	T				.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.								.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		323	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																							.
Query SS confidence								.	.																																							.
Query Sequence		C	G	R	K	F	E	.	.	N	P	V	Y	W	G	V	D	L	S	S	E	H	E	R	Y	L	A	E	E	H	F	K	A	P	V	V	V	K	N	Y	P	K	D	I	K	A	F	.	Y	M	R	L	N	E	D	G	K	T	V	A	A	M	D	V	L	A	P	G	I	G	E	I	I	G	G	S	Q	R	E	E	R
Query Conservation								.	.																																							.
Alig confidence								.	.																		.																					.
Template Conservation																											.
Template Sequence		H	N	V	E	N	E	F	G	N	T	F	T	Y	G	E	D	I	A	E	A	A	E	R	F	M	.	T	D	T	I	N	K	P	I	L	L	N	R	F	P	S	E	I	K	A	F	Y	M	Q	R	D	A	Q	D	N	T	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V	G	G	S	M	R	I	W	K
Template Known Secondary structure		T	T		B		T	T	S	S	B			T	T	S											.					T	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							T	T	T									B
Template Predicted Secondary structure																											.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	V	L	D	E	R	M	L	E	M	G	L	N	K	E	D	Y	W	W	Y	R	D	L	R	R	Y	G	T	V	P	H	S	G	F	G	L	G	F	E	R	L	I	A	Y	V	T	G	V	Q	N	V	R	D	V	I	P	F	P	R	T	P	R	N	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	E	L	S	K	A	F	K	N	V	E	I	D	P	K	P	Y	Y	W	Y	L	D	Q	R	L	Y	G	T	C	P	H	G	G	Y	G	L	G	L	E	R	F	I	C	W	L	T	N	T	N	H	I	R	D	V	C	L	Y	P	R	F	V	G	R	C	V
Template Known Secondary structure												T	T			S	G	G	G									T	T																				T		S	S	G	G	G	G	S	S	S			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.