Job Description P0A8M0 Confidence 41.57% Date Thu Jan 5 11:08:10 GMT 2012 Rank 138 Aligned Residues 80 % Identity 18% Template c2vw9B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:single-stranded dna binding protein; PDBTitle: single stranded dna binding protein complex from2 helicobacter pylori Resolution 2.30 Å

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		19	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure										.	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.
Query SS confidence										.	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.
Query Sequence		E	V	T	V	R	G	W	V	.	.	.	.	.	.	R	T	R	R	D	S	K	A	G	I	S	F	L	A	.	.	.	.	.	V	Y	D	G	S	C	F	D	P	.	.	.	.	.	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V	I	V	T	G	K	V	V	A
Query Conservation										.	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.
Alig confidence										.	.	.	.	.	.															.	.	.	.	.										.	.	.	.	.															.	.
Template Conservation																																																															.	.
Template Sequence		K	V	I	M	V	G	R	L	T	R	N	V	E	L	K	Y	L	P	S	G	S	A	A	A	T	I	G	L	A	T	S	R	R	F	K	K	Q	D	G	T	L	G	E	E	V	C	F	I	D	A	R	L	F	G	R	T	A	E	I	A	N	.	.	Q	Y	L	S	K	G	S	S	V	L	I	E	G	R	L	T	Y
Template Known Secondary structure										S	S								T	T	S																	S	S	S	S																						.	.					T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		2004	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.			.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.
		83	.			.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure				.	.					.	.	.	.
Query SS confidence				.	.					.	.	.	.
Query Sequence		S	P	.	.	G	Q	G	Q	.	.	.	.	Q	F	E	I	Q	A	S	K	V	E	V	A
Query Conservation				.	.					.	.	.	.
Alig confidence				.	.					.	.	.	.
Template Conservation
Template Sequence		E	S	W	M	D	Q	T	G	K	K	N	S	R	H	T	I	T	A	D	S	L	Q	F	M
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		2082	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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